Camelina sativa (false flax): 104717953
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Entry
104717953 CDS
T05044
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104717953
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104717953
Pre-60S particles
Other pre-60S particles
104717953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
UNC45-central
NopRA1
HEAT_2
INT1_R3
Motif
Other DBs
NCBI-GeneID:
104717953
NCBI-ProteinID:
XP_010433892
LinkDB
All DBs
Position
10:8393491..8399589
Genome browser
AA seq
1130 aa
AA seq
DB search
MAAFEDRADENDEIAFKDGNTDISQQLMDRYGKSSASQHRHLVATAVAMRSILTSESLPP
SPPAFFAAAISSVDSSTEDPMAVSALLTFLSIVLPLVPSGEISATMARDAVAVLVNPIDG
GVDKLGVASLRAGVKCIGTLLIGFCDLDHWESLQIGFGLLLKFAIEKRPKVRRCAQECLE
KLFGSLQSSTVIKEASNTVYILLKEYKQVLSDLSSKKIDEGSKVDSTMRPEDAEAAHVLN
VLSATIPFLSAKVSSRVFSELCKLMGSQFSPLTRQILKAIDTIFKNSEDTTVVPEIEGLV
TSLTSYLSLHDKNPADTIVHVTTLLKSALEKAYSVEPTLCLRKLPLVCGSLAGLLTSTDD
VASQASITLKDLISSHIDTNKLLIEGSLSCEDEDNETSGENINAARCVCSVFQSALNSCD
GIPKEHILSVINILIEKLGERSYILAKNIILKLADLMEHATGDMSSSQYLQQCIGSAVVA
MGPVRLLALLPITLHAESHSCTNAWLIPVLRKYIIGASLEYYVDHIVPLAKSLMLASKGA
KKSAHGKELRAYGHELLRLLPAFCNYPVDVHQQFGSLAKLMVKFIKNKSFMHEAVALSLQ
MLVNQNKRMPKPSTDMDEATAISEDATTELESRFHYSKKASTKNMKALASSSTELLQTLV
DVFTASDTEISADFKAAIGCLASTLDSSVRKKILISLLNKFDPAGEFETEGKVNQSNDSI
DEEKETCSATKTQLKRSAVLDLASSFVEGAQEDLIELIYNLVRQSFQATDEADLCGAYDT
LSRVLQEHGSFCSSHFAEVIEMLLSHKTPEDAASSISRFACLHVLMAHGIQSSTEEENEK
AFLILNEIILTLKDGKEEHRKAACDALVMVYTTLKNSSSVSGDELCPKLINMITGYIDGS
SPHIRSGAVSALSALIYKDPEICLSSPELLSSVLPLLHTKSIEIIKAVLGFVKVLVSTSQ
AQDLQSLLQNLLYEILPWSSVSRHYFKSKVTIIVEIMVRKCGTRAVQLATPDKHKSFIQT
VLENRSGKSKDKEETNDSQTTSTDPSREPRKRNYREASSETTAKQDGNKFKRQKGTHQRH
TPASDINGSRTGPQRHGNRSFGKHREASGNNHKSGKETRKPQKNRFRKAQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttgaagacagagcagatgaaaacgatgaaattgccttcaaagatggcaac
actgatatctcccaacagcttatggaccgttacggcaagtcctcagcttcgcagcaccgt
catctcgtcgccaccgccgtcgctatgcgctccattctcacctctgagtctcttccgccg
tctcctcctgctttcttcgcagctgctatatcctctgtcgattcttccacggaggatccc
atggcggtttctgctttgcttactttcctgtccatagtccttcctctggttccttcagga
gaaatttcagctactatggctcgagatgctgtggctgttttggtaaacccaattgatggt
ggggttgataaattaggtgttgcgagtttgagagctggcgtgaagtgcattgggactttg
cttattggtttctgtgatttggatcattgggaatctcttcaaattggatttggtttactt
ctcaagttcgccattgagaaacgtcccaaggttagaagatgcgctcaagagtgtttggag
aagttatttggttctctacaatcatctactgttataaaggaagcaagtaatacagtttat
attttacttaaagaatataagcaagtactatctgacttaagctcaaaaaagattgatgag
ggttctaaggttgactcaacaatgaggcctgaggacgcagaggctgcccatgtgctaaat
gtgctcagtgctacaattccgtttctctctgccaaagttagttctagagttttttcggaa
ctttgcaagcttatgggttctcagttttcgccgttgacgaggcaaattctcaaagcgatt
gacactatcttcaagaattcagaagatacaactgttgttcctgagatagaaggacttgta
acttctttgactagttatttatctttacacgacaagaatcctgctgacacgatcgtgcat
gtgaccaccctattaaaaagtgctttggagaaagcctactcagttgaaccgacattatgt
ttaaggaaacttccgctagtttgtgggtcattagcaggccttctgacttccacggatgac
gttgcatcccaagcctcaattacattaaaagacttgatcagtagccacattgatacaaat
aaacttcttatcgagggcagcttgtcttgtgaagacgaggataacgaaacgagtggagaa
aatataaatgcagcaagatgtgtatgctctgtctttcagagtgccctaaactcatgtgat
ggaattccaaaggagcacatcttatctgtcataaatattttgatcgagaaacttggagag
cgttcatatattcttgcaaagaatatcatattaaagcttgctgacttgatggaacatgca
actggagatatgtctagctcacaatatcttcagcaatgcattgggtctgcagtggtcgca
atgggaccagtaaggctactggcacttcttcctatcactcttcatgctgagagtcactca
tgcacaaatgcttggctaattcctgtcttaagaaaatatatcattggagcatctcttgag
tattatgtcgatcacattgttccacttgcaaaatcactgatgcttgcttctaaaggagcc
aaaaagtcagctcacggaaaagagttgcgggcctatggtcatgaacttctgagactgtta
cctgccttctgtaactatccagttgatgtgcaccaacaatttggatcgttagccaaactg
atggttaaatttattaaaaataaatctttcatgcatgaagccgtggccctttctctacag
atgcttgtaaatcagaataaaagaatgcctaagcccagtacagatatggacgaagcaaca
gccataagtgaagatgcaacaacagaactggaaagtagattccactattcgaagaaagct
tcaacgaaaaacatgaaggctttggcatcaagctcgacagagttgcttcagactcttgtt
gatgtattcactgcttcagacacagagatcagtgcagactttaaggctgcaattggatgc
ttagcttctactctggattcgtcagttaggaaaaagattctaatttctttgctaaataag
tttgatcctgctggtgaattcgagactgaggggaaggtcaatcagtcgaatgattcaatc
gatgaagaaaaagaaacctgcagtgccacaaagacacagttaaagaggagtgctgtgctg
gatcttgcatcttcatttgttgaaggagcccaggaagaccttattgagttgatttataat
cttgttcgccaaagttttcaggccaccgacgaggctgatctttgtggggcatatgatact
ctgagcagagttctacaggaacatggttcgttttgttcatctcattttgcagaggtgata
gagatgttactcagccataaaactccagaggatgcagcgtcttctataagccgatttgca
tgtctccacgttctaatggctcatggaattcagtcaagcaccgaggaggagaatgagaaa
gctttccttattctgaacgagataatcctgacacttaaagatgggaaagaagaacatagg
aaagcagcttgtgatgcactggttatggtatataccaccctaaaaaattcatcctctgtc
agcggtgatgaactttgtcccaaattgattaacatgataacgggttatattgatggatcg
tcgccgcacataaggagtggagcagtgtctgcattatctgccttgatatacaaagaccct
gagatctgcctatcgtcacctgagcttctttcatctgttttaccgttgcttcacaccaaa
tccattgagattataaaagctgttttgggttttgttaaagttttagtctcaacatcgcaa
gcccaggacttgcagagtctactgcagaatctcttatacgaaattctcccctggtcgtct
gtttcaagacactattttaagtcaaaggtaacgatcatagttgagattatggtaaggaag
tgcggcacccgcgcagtccaattagccacaccagacaagcacaagagtttcatccagaca
gttttagagaaccgttcggggaaatcaaaagacaaagaagagaccaatgattcacagact
acatccactgatccatccagagagccgcggaaaagaaattacagagaagcttcatcagaa
actacagccaaacaagacggcaacaaattcaaacggcaaaagggaacacatcaacgacac
acacctgcttccgacattaatggaagtagaacaggaccacagcgccatggtaacagaagc
ttcggaaaacatagggaagcttctggaaacaatcacaagtcaggaaaagagacacgaaag
ccacagaagaacagattcaggaaagcacaatga
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