Camelina sativa (false flax): 104718078
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Entry
104718078 CDS
T05044
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104718078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104718078
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
104718078
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
104718078
NCBI-ProteinID:
XP_010434054
UniProt:
A0ABM0U0G8
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Position
10:9096398..9099839
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AA seq
533 aa
AA seq
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MKSEREVKNGVTEEEREVKRKRSDSPPPPLGFNNPLLPLANAYADDDEDAENEQKKKSQT
RGVVKGEGNGNKAQEEEVDDDEDDNAFKGRRKQSRQVEVRRDCPYLDTVNRQVLDFDFER
FCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEADHHVYINLLTEKVYCLPDSYEIN
DPSLDDIRHVLNPRFSRAQVEELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQS
LMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKK
RFRIGQQSDPVEFMSWLLNTLHVDLRPSKDASSIIHQCFQGELEVVKEYQGNENKETSRM
PFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARMRYRVTRSP
PYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPTAPEGEKVCSKYNLIANIV
HDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLSQMVELSEAYMQIYEQQEK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgagagagaagttaagaatggtgttactgaggaagagagagaggtgaagagg
aagaggtctgattcgccacctccaccactgggttttaataaccctcttttgccgttggct
aatgcttacgctgacgacgatgaggatgcggagaacgagcagaagaagaaatctcaaact
cgtggagttgtgaaaggagaagggaacggtaacaaagctcaagaagaggaagtcgatgac
gacgaagatgataatgcctttaaggggagacgaaagcaatcacgccaagttgaagttcgt
cgtgactgtccttatcttgatactgttaatcgtcaggtgttggattttgatttcgagagg
ttttgttctgtgtccttgtcaaatttgaatgtgtatgcttgtctcgtctgcggtaagtat
ttccaaggaaggagccagaagtctcatgcttatacgcatagtctggaagcagaccaccat
gtttacatcaatcttctgacggagaaggtttactgtcttcctgatagttacgagatcaat
gacccttctttggatgacattcgccatgttttaaatccaaggtttagtagggctcaagta
gaagagctcgacaagaataggcagtggtctagggctcttgatggctctgactatcttccg
ggaatggtgggattgaacaacatacaaaagacggagtttgtgaatgttacaatccaatcg
ttgatgagagttactcctttaaggaacttcttcctcattcctgagaattatcagcattgc
aagtctcctcttgttcaccgttttggagaactcactcggaagatttggcatgctcggaac
tttaaaggacaggtgagtccacatgaattcttgcaagctgtcatgaaggccagcaaaaaa
cggtttaggataggccaacagtcagatcctgttgagtttatgtcgtggctcctcaacact
ttgcacgtggatcttaggccttcaaaggacgccagcagtatcatccaccagtgcttccag
ggtgagttggaggttgtgaaagagtatcaaggtaatgaaaacaaagaaacctccaggatg
ccttttctgatgcttgggctagatttgccaccgcctcctcttttcaaagatgtcatggag
aaaaacataattccgcaggttgctctattcgatttattgaagaagtttgatggagaaact
gtgacagaggtggttcgcccaaagctagccagaatgagatatcgtgtaaccagatcgcct
ccttacttgatgttccatatggttcggttcaagaagaataactttttcaaggagaagaac
cctacccttgttaacttcccagtgaaggacatggagctgagggattacataccatcattg
cctacagcccctgaaggcgagaaggtgtgttcaaagtataatctaatcgctaacattgta
catgatggtaagcctgaggatgggtacttcagagtctttgtgcagaggaagtcacaagaa
ctatggtacgagatgcaggatttgcatgttgcagagacactttcccaaatggtagaacta
tcggaagcatacatgcagatatatgagcagcaggagaaatag
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