Camelina sativa (false flax): 104718164
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Entry
104718164 CDS
T05044
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104718164
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104718164
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104718164
Protein phosphatases and associated proteins [BR:
csat01009
]
HAD phosphatases
Fcp/Scp phosphatases
104718164
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104718164
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
FlK
Motif
Other DBs
NCBI-GeneID:
104718164
NCBI-ProteinID:
XP_010434148
UniProt:
A0ABM0U0Q2
LinkDB
All DBs
Position
10:complement(9581592..9590752)
Genome browser
AA seq
970 aa
AA seq
DB search
MFGNNNRVELFHEDGRVGEMEIYPPRDLLQQQYHQQEDDVMKQRKKKQREVMEKAKMGIR
TSHFSSISERSPPLSVLTTISSFGLCFKLEASASPVQESLSFFYTSCLTENKTAVMLLGE
EELHLVAMYSENINNDRPFFWAFVVAPGIYESCLVMLNIRCLGIVFDLDETLVVANTMRS
FEDKIDGLQRRINNEMDPQRIAIMVAEMKRYQDDKNLLKQYVDSDQVVENGEVMKVQSEI
VPALSDNHQPLVRPLIRLQEKNIILTRINPMNRDTSVLVRMRPSWEELRSYLTAKGRKRF
EVYVCTMAERDYALEMWRLLDPEGSLININDLLARIVCVKSGIXXXXFNVFLDGTCHPKM
ALVIDDRLKVWDEKDQPRVHVVPAFAPYYSPQAEASATPVLCVARNVACGVRGGFYKDFD
DSLVPRINEISYENDDIPSPPDVSHYLVPEDDTSLNGNKDPLSYDGVADAEVERRLKEAI
SSSSVVLPAANIDPRIAAPVQYSMASVSASSVSVPVPVPVVQQAAPQPSAMAFPSIPFQQ
PTSIAKNLVPVEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDPASSEPPFPQ
RPPVQAPPPHVQPRNGWFPVEEEMDPAQIRRAVPKEYPLDSEMIHMEKHRPRHPSFFSKI
DNSTQSDRMLHENRRPPKESLRRDEQLRSNNNLPGSQPFYGEEASWNQSSSRNSDLDFVP
ERSVSATETSADVLHGIAIKCGAKVEYKPSLVASTDLRFSVEAWLSGEKIGEGTGKSRRE
ALHKAAEASLQNLADVYMRSHGDSVPSHRDASPFTNGNMIMGNANALDNQPFGRDETAMP
VPSRPTDPRLEGSMRHTGSITALRELCASEGFEMAFQSQRPLPSDMVHRDELHAQVEIDG
RVLGEGVGSTWDEARMQAAERALCNVRSMLGQPLHKRQGSPRSFAGMSNKRLKPDFQRSL
QRMPSSGRYS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtaataataatagagtagaactgtttcatgaagatgggagggttggggaaatg
gagatataccctccaagggacttgctgcagcagcaatatcatcagcaagaagatgatgtg
atgaagcagaggaagaagaaacagagggaagttatggagaaagccaagatgggaatcaga
acaagccacttttcttcaattagcgagagatctcctcctctttctgtacttacgacaatt
tcatcttttggcctgtgtttcaaattggaagcttcagcttcccctgttcaggagtcacta
agttttttctacacgtcctgtctcacggagaacaagacggcagtaatgctcctgggtgaa
gaagagctccatttggttgccatgtactcagaaaatatcaacaatgaccgtccttttttc
tgggcatttgttgttgctcctggaatctacgagtcctgtcttgtcatgttgaatattaga
tgtctgggtattgtctttgatcttgatgaaacccttgtagtggcgaataccatgcgctca
tttgaggataagattgatgggttgcagcggagaataaacaatgagatggaccctcaacgc
attgccattatggtggctgagatgaaacgttatcaagatgataaaaatctattgaagcaa
tatgttgacagtgaccaggttgttgaaaacggggaggtgatgaaggtgcaatctgaaatt
gttcctgccttgtctgacaaccatcagcctcttgttcgtcccctgataaggttgcaagag
aagaatattatcctgactcgcattaatccgatgaatcgtgatacaagtgttcttgtgaga
atgaggccttcatgggaggaacttcgaagctatttgacagcaaaggggcgcaagcgtttt
gaagtatatgtttgcacgatggctgaaagagattatgccttagagatgtggaggctcctt
gatccagaagggagtttgataaacataaatgacttgctagctcgcattgtttgtgtgaaa
tcaggtatannnnnnnnnnnnttcaatgtgtttctcgacggaacctgccatccgaagatg
gcactggtaattgatgatcggctgaaagtttgggatgagaaggatcagccgagggtgcat
gttgttcctgcattcgctccctattattctcctcaggcggaagcatctgcgacaccagta
ctatgtgttgccagaaacgttgcttgtggtgtcagaggtggattttacaaggattttgat
gatagtctggtaccaagaattaatgaaatatcttatgagaatgatgatattccttctccg
cctgatgtcagccattatttggtgccggaggacgatacatcgttaaatgggaacaaagat
ccactttcctatgacggagtggctgatgctgaagtggaaagaagactgaaggaggcaatt
tcttcatcttcagttgtccttccggcggcaaatatagatccgaggatagctgctcctgtt
cagtactccatggcatctgtatctgcttcttctgtttcagttccagtaccagtgccagtc
gttcaacaagcagcaccacaaccatctgccatggcctttccaagtattccgtttcaacaa
ccaacatcaatagctaaaaacttggttcctgtagaaccaagcttgcagagttctcctgct
agagaggaaggtgaggtacctgaatcagagttagatccagatactaggaggaggctcctc
atattgcagcatggacaagatactagggatcctgcttcaagtgaacctccttttcctcag
agacctccagttcaagctccacccccacatgtgcagccaagaaatggttggtttcctgtt
gaggaggagatggatccagctcaaatccgtcgagcagtccccaaagaatatccattggat
tctgaaatgattcatatggaaaagcacaggcctcgccatccatcatttttttctaagatt
gataactcaactcaatctgacaggatgcttcatgagaatcgcaggccgccgaaggagtcg
ctccggagagatgaacaattaaggtcaaacaacaatctacctggctctcaacctttctat
ggggaggaggcgtcttggaatcaatcttcttctaggaacagtgatctggacttcgtacct
gaacgaagtgtctcagcaacagagacttctgctgatgttctacatggaattgctatcaaa
tgtggcgccaaggtggagtacaaaccaagtttggttgctagtacggatttgcggttttct
gttgaggcttggctttctggtgaaaaaattggagaagggactggcaaatcgagacgagaa
gccctacacaaggctgctgaagcttctctacagaacttagctgatgtatatatgcgttca
catggtgactcagtgccaagccacagagatgctagccccttcaccaatggaaatatgata
atgggaaatgcaaatgcgcttgataatcagccatttggtagagatgaaacagcaatgcca
gttccttctagacctacagatccgagattagaaggttctatgaggcacactggctccata
actgcgcttagggaattgtgtgcatcggagggttttgagatggcttttcaatctcagcgt
ccacttccatctgacatggtccacagagatgagttacatgctcaggttgaaatagatggg
cgtgttttaggggaaggagttggatcaacatgggatgaagctcgaatgcaggctgctgag
agagcactgtgtaatgtgagatcaatgcttggtcaacctctgcataagcgacaaggatct
ccacgatcatttgccgggatgtcaaacaagcgtttaaagccagactttcaacggtctctg
caacggatgccatcttcaggaagatactcttaa
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