Camelina sativa (false flax): 104718575
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Entry
104718575 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104718575 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104718575
03036 Chromosome and associated proteins [BR:
csat03036
]
104718575
Enzymes [BR:
csat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
104718575
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104718575
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104718575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
DUF5917
Motif
Other DBs
NCBI-GeneID:
104718575
NCBI-ProteinID:
XP_010434640
LinkDB
All DBs
Position
10:11948562..11958484
Genome browser
AA seq
1816 aa
AA seq
DB search
MGSSVITSLSLSFKQVPPAAVPAFLDCVLSSTGVSPSTLFESLINELPFRLEDTFNGEKR
FDSYDCNHIASLVAGLCHLLKNFAGFGAADNHNALQSFVWRVFIPLMKMVRAYDLDMLNE
IVQSFFDVVIETSALDILGVSLVPFLMRSVGVSMGMLQHEESDFIKWGELLLCDSLNTTN
MDENYIANLSGSFPIPLSCHLLNLILNAAFQSHQAAPEVESFAAGMLWDLCNTTERLLSQ
SVEHRSCAVSFLLPAIFKAFSSQSSVKISRQGNMYILSRNGFKKRIWECCKKLFSVGSME
RRDAYSVLYLCLSTGSWTDETESFVSEKDPVEFDFRSEQEFWDEIKKGLVVDESLVRKQS
LHILKSVLSISEVSKTGSEKKPEVDSVHRSLTRKETWAEKEAKSLGVGELYGSVDSGLSS
QQEWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYDGSLKSDCNNSHHGHMEIPD
EETRVLNWLEVLWNRGFRHDNPLVRCTVMESFLGIEWRRYETCTQSMSQTFVLGPFIEGL
NDPIHHKDFGLKGIYTSRTIEGAAQYVCSYTSCLNPRNRVGFLINLASLAKKQSFGRAGF
MALVQCIVSTSYVVGGYGDKDNKLSGTAHEPSCEHLSQDDMTHILDVLKFVAESSRQHFN
HKYRIRVYQKVLETAASAVNPCMVPLGTLLQFVSAIPREFTDHDGSLRKLMLEWLQGCNR
KTSNNLCTDGNRLLASLYEYLKGFISDHGESFDDDDLEAWDSQTKRWARVFFLIINNEEH
LTDIIMFVQNSGHNFFQEKNHLQRAPTKFLIFILSMLLELQNMQDGISELSSSVKSKLCI
ASVEKTGKQIVDDASIIKKKFAVALLSILKELIPFAESSCSIFWSHTTVENGVLSGSVIG
KLGGPSQRRLSGPSTTAVLEAVTLVKTIGWISSYCAQVTSGVELKLALAFFWKFTQHTIS
SQICNSEAAAEVYLAAFEALASVLNAFVSLCSAGAFNLLENDNTLLSMVDGEFWLQVSVP
AFLQNINHLLTAGLLVRSRRAVLLSWKWLCVESLLSLMHILDARRIPGDRKSFFSDDTVT
SIFQDIVESLENAGEGSALPMLKSVRLALGILASGNSSLDGFLGVDTQTMWQLVKSCWIL
HISCKKRRVAPIAALLSSVLHSSLFSNKDMHIAEDGHGPLKWFVEKILEEGQKSPRTIRL
AALHLTGLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLLAKSPD
PELTELFINTELYARVSVAGLFQKLASLADMVEPESQYQDCEDALVAGKLFLLELLDAAV
HDKDLSKELYKKYSAIHRRKIRAWQMICIMSRFVSSDIIHQVMDNVHICLHRNNLPAVRQ
YLETFAINIYLKFPALVKEQLVPILKNYDSKAQQALSSYVFVAANIILHAEKTAQQTHLR
ELLPPIIPLLTSHHHSLRGFAQLLVHRVLFRLFPPVESASSQTISLEKLSFENLKSYLDK
NPDCSRLRASMEGFLDAYDPSTSATPAGVFVNRVEDSEFECVPTCLMDNVLSFLNDVRED
LRASMAKDVVAIKNEGFKMNEEPNRRLIMSNTDEQKLSEPSSLDFQRKITLSKHEKQDAS
STSVLRNGETYKRLFEMEKEDELVSQLLRSRSMEVERLKSDRQSLILVASLVDRIPNLAG
LARTCEVFKASGLVVADANIIHDKQFQLISVTAEKWVPIMEVPVNSLKLFLEKKKREGFS
ILGLEQTANSISLDKHQFPKKTVLVLGREKEGIPVDIIHILDACIEIPQLGVVRSLNVHV
SGAIALWEYTRQQRIQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgggttcctctgtgattacttcgctgtccttgagcttcaaacaagttccaccagcagct
gttcctgcttttcttgactgtgttttaagctccacaggcgtatctccctcgacccttttc
gaatcacttatcaatgagttgccttttcgtttagaggatacgtttaatggggagaagagg
tttgattcttatgattgcaaccacattgcttcattggttgctgggctttgtcatctactt
aaaaattttgcaggttttggtgctgcggataatcataatgcgttgcagtcgtttgtgtgg
agggtgtttattccactcatgaagatggttcgtgcatatgatttggatatgcttaatgag
attgtacaatcgttctttgatgtagtgattgagactagtgcattggatatattgggagtg
agcttggtgccttttttaatgagatcagttggtgtttcgatgggaatgcttcaacacgaa
gaatcagatttcatcaagtggggcgagctgttgctttgtgattctttgaatacaacaaat
atggatgaaaactacattgcgaatttgtctggatcatttccgattccactgtcttgccat
cttctgaatttgatactgaatgctgcttttcaaagtcaccaagcagctccagaggttgaa
agttttgcagctggtatgctatgggatttgtgtaatacgactgagcgtcttttgtcacaa
agtgtagaacatcgttcgtgtgctgttagtttcctcctccctgctattttcaaggcattc
tcttctcagtcctctgtgaagatctcacgccaaggaaatatgtacatactttcaaggaat
ggcttcaaaaaaagaatttgggaatgctgcaagaagctgttctcggttgggtcaatggag
agaagggatgcttacagtgtcctctatttgtgtctttctactggctcttggacagacgaa
actgaaagttttgtttcagaaaaagaccctgttgaatttgactttagatccgaacaagag
ttttgggatgaaatcaagaaaggcttggttgttgatgagagcttagtaaggaagcagtca
ttgcatatactaaaatcggttttatctataagtgaagtgagtaagaccggttctgagaag
aagcctgaagtggattcagttcatcggtccctgacaagaaaggagacgtgggcagaaaag
gaagccaagtcgcttggtgtgggagaattgtatgggtctgttgactctgggttgtctagt
cagcaggagtggcaagcttttctgctcctgtatgagatgcttgaagagtacggcactcac
cttgtagaggcagcatggagtaaccagattgatttattaatcaagtcatctctcagatat
gatggatccttgaaatccgactgtaataactctcatcatggtcacatggaaattccagat
gaagaaactagagttttgaattggttagaggttctttggaataggggatttcgtcatgat
aaccctctagtcaggtgcacggtcatggagtcttttctaggtatcgagtggagaagatac
gaaacatgtacacaatcaatgtcccaaactttcgtgcttgggcctttcatagaggggttg
aatgatcctatacaccacaaggattttgggttgaaaggaatctatacctcaagaacaatt
gaaggtgcagctcaatatgtgtgttcgtacacaagttgcctcaacccaaggaatcgagtt
ggatttttgatcaacttggcatctcttgcgaagaaacagtcttttggtagagctggattt
atggctctcgtacaatgcattgtttctacgtcatatgtggttggaggatacggggacaag
gataataaattatctgggactgcccatgaaccttcttgtgaacatttaagtcaagatgat
atgacacatatactggatgtcttgaagtttgttgcagagagcagcagacagcattttaat
cataaataccgtatccgagtttatcaaaaagtgttagaaactgctgcttctgcggtgaac
ccttgtatggttcctctcggaacactattgcagtttgtttcagcaattcctcgggagttt
actgaccatgatggttcattgcggaaattgatgctagaatggcttcaggggtgcaacaga
aagacttccaacaatttatgtactgatggcaatcgtcttctggcgagtctttatgagtat
ctgaaaggatttatcagtgatcatggtgagagttttgatgatgatgacttggaggcatgg
gattcccaaacaaaacgatgggcaagagtatttttcctcataattaataatgaagagcat
ctcaccgatatcataatgtttgtgcaaaatagcggccataattttttccaagagaagaac
catttacaacgggcacctacaaagtttttaatatttattctgagtatgcttttggagctc
cagaacatgcaagatggaatttctgagcttagttcttcggtgaaaagcaagttgtgcatt
gcctctgttgagaaaactggcaaacagattgttgatgatgcttcaattataaagaaaaag
tttgctgttgctctcttatcgattctgaaggagctgattccatttgctgagtcatcttgt
tcaatattttggtctcacactactgtggagaatggtgttctgtctggttctgttatagga
aaactaggggggccaagtcaacgccggctatctggtccttctacaacagctgtactagaa
gctgtaacgttggtgaaaactattgggtggatctcgtcatactgtgcccaagtcactagt
ggtgttgaactcaaattagcattggctttcttttggaagttcacccagcataccatatca
tctcaaatttgtaattctgaggccgcagctgaggtctatcttgcagcgtttgaggcgcta
gcttcagtattgaatgcatttgtgtccttgtgctcagctggagctttcaacctattagaa
aatgataatacattgttatccatggtagatggtgaattttggttacaagtttcggttcca
gctttcctccagaacattaatcatcttctcacagcaggacttctagtaagaagtaggagg
gcagttctcctaagctggaagtggctttgtgtggagtctctgttatcactcatgcatatt
cttgatgccagacgtattccaggagatagaaagtcgttcttctcagatgatactgttaca
agcatttttcaggatattgtagagagccttgaaaatgctggggagggttccgctttgcct
atgctgaaatctgtcagactcgcgttggggatacttgcatctgggaactcatctttggat
ggtttcttgggtgtggatactcagacgatgtggcagttggtcaaatcatgttggatattg
catatcagctgcaagaaaaggagggttgcacctattgctgcgcttttgtcttctgtgttg
cattcttctttgtttagtaataaagacatgcacatagctgaagatggacatggtccgctg
aagtggttcgttgaaaaaatactcgaggaaggtcagaaaagtccacgcacaattcgcctt
gcagccttgcacctgacaggtctctggctcatgtacccaaggacgataaagtactatatt
aaagaattgaggctcctgactctctatggttctgttgcatttgatgaagattttgaagct
gaattatcggacaataatgatgcaagaactgaagtatcattattggccaaaagtccagac
cctgaactgacagagcttttcatcaacacggagttgtatgcacgtgtctctgttgctggt
ctgtttcagaagctggctagtttggccgatatggttgaaccagaaagtcaatatcaagat
tgtgaggatgctctcgtggctggaaaattgtttctgttggagcttcttgatgcagcggtg
catgataaagacttgtcaaaggagctttacaagaagtatagtgctatccatagaaggaaa
atacgtgcttggcagatgatatgcattatgtcgcgatttgtcagcagtgacatcattcac
caagttatggacaatgtgcacatatgcttacatagaaataacctgcctgctgttcgacaa
taccttgaaacatttgccatcaacatttacctgaaatttccagcattagttaaagagcag
ttagttcccatattaaaaaattatgactctaaagctcagcaagcgctctcgtcctatgtc
tttgtagcagccaatatcatcctccatgccgaaaagacagctcaacagacacacctgaga
gaacttcttcccccaataataccgttattaacttctcatcatcatagcttacgtggtttc
gctcagttattagtgcatcgagtactctttagactatttccccctgtggagtcggcatcc
tctcaaacaatatccctggagaaactttcttttgagaatttgaagtcttacctggacaag
aatcctgattgttcgagattgcgagcatcaatggaaggatttcttgatgcctatgatccc
agcacatctgctactccggctggtgttttcgtcaatcgtgttgaggacagtgagtttgaa
tgtgttccaacatgcctcatggacaacgtgctctcttttctgaatgatgtaagggaagat
ctccgtgcttccatggcaaaggatgtagttgccattaagaatgaaggcttcaagatgaat
gaagagcccaaccgtcggttgatcatgtccaatacagatgaacaaaagctttcggagcca
tcttcgttggacttccagaggaagatcactctatcgaaacatgagaagcaagatgctagc
tcaacttctgtgctccgaaatggggaaacttacaagcggctctttgaaatggaaaaagaa
gatgagctcgttagtcagctcttacgatctagaagcatggaggtcgaaaggctaaaatct
gatcgacagagtttgatccttgtggcttcattggttgatcgtattcctaatcttgctgga
ttagcgcggacatgtgaggtgtttaaagcatcaggtctagttgttgcagatgcaaacata
atacatgacaaacagttccaactaatcagtgtgactgctgagaaatgggttccaatcatg
gaagtcccagtgaacagtttgaaactgttcttggagaagaagaaacgggaaggcttctca
atcttgggactggaacagacagcaaacagcatttcacttgacaaacaccaattcccaaag
aagacggttttggtgttgggtcgtgaaaaggaaggcatccctgtggatataatccatata
cttgacgcttgtatcgagatcccacaacttggagttgttaggtccctcaatgttcatgtc
agcggcgccatcgccctctgggaatacactcgacaacaacgcattcaatag
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integrated database retrieval system
