Camelina sativa (false flax): 104718881
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Entry
104718881 CDS
T05044
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104718881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104718881
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104718881
mRNA degradation factors
5'-3' decay
Decapping complex
104718881
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NCBI-GeneID:
104718881
NCBI-ProteinID:
XP_010435003
UniProt:
A0ABM0U2W1
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Position
10
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AA seq
795 aa
AA seq
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MERSNSKDFYNFARTTSSDNNNALFDASQYEFFGQSLEEVELGGLDEDASVRGHVDDEEY
HLFDKREGAGLGSLSEMDDLATTFAKLNRNVTGPKHLGVIGDRGSGSFSRESSTATDWTQ
DNEFTSWLDQHTLEEQAQEASWPSQPQSSANSNSLYRTSSYPQKQTQLQHYSSEPIIVPE
SAFTSFPSPGKRSQQSSPSHIHRAPSLPGGSQSNFSAPNASPLSNSTYHLSGLSHGPPHY
GSNLARYASCGPTLGNMMQPPHWVTDPGLLYGEHSGLLHSLVQQQHLQQLPPRNGFTSQQ
LISLQQRQSLAHLAALQSQLYSSYPSPSQKAPFGVGEVREHKHKSSHRSRKNRGISQQNS
DLASQKSESGLQFRSKYMTSEEIESILKMQHSNSHSSDPYVNDYYHQARLAKKSAGSRTK
PPQLYPSHLKDHQSRSRNSSSDQQPQVHVDALGKITLPFISRPRALLEVDSPPSSGDGRS
GHKGSEKHLEDEPLVAARVTIEDAFGVLIDIVDIDRTLQFNRPQDGGAQLKRKRQILLEG
LATSLQLVDPFSKTGQKTGLTAKDDIVFLRIATLPKGRKLLTKYLQLLVPGTEIARVVCM
AVFRHLRFLFGGLPSDSLAAETIANLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRP
IGSPSGDGASVVLVSLLERAAEVVVVVAAVPRVNNNSNDGLWRASFDEFFSLLTKYCRSK
YEMIHGQNQDNASDVLELAIKREMPAELLRASLRHTNEDQRNFLLNFGRRASPVNESTTT
TRASGGQIKSEFVRG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagagatctaattctaaagatttctataacttcgctcggacgacttcttcagataat
aataatgctctttttgacgcatctcaatatgagttctttggtcaaagtcttgaagaagtt
gaattgggtggtcttgatgaagatgcgtctgttcgtggacatgttgatgatgaagagtat
cacttgtttgataaaagagagggtgctggtttaggatctttgtctgagatggatgatctt
gccacaacttttgcaaagctgaacagaaatgttactgggcccaaacaccttggagtaatt
ggtgacagaggatcagggtccttttcaagggaaagttccactgctacagattggacacag
gataatgagttcacaagctggttggaccaacacacgcttgaagaacaagctcaggaagct
agttggccttcacagccacagtcatctgccaattcaaattctctgtacaggacatcctca
tatcctcagaagcaaacacagctgcaacattacagtagcgaaccgattattgtaccagaa
tccgcgtttacatcttttccttcgcctggcaaaagatcacaacagtcttcaccgagccat
attcatcgtgctccttctcttcctggtggtagtcagtcgaatttttctgctccaaatgca
tctcctctgtcaaactcgacttaccatctttcaggattgtcacatggaccgccgcattac
ggtagtaatttggctagatatgcctcatgtggtcctactcttggtaacatgatgcaacct
cctcactgggtgactgaccctggccttctgtacggtgagcattcggggttgttacacagt
ctagtacaacagcagcatttgcaacaattgcctcctcggaatggtttcacttctcaacag
ttgatatcccttcagcagagacaatctctagctcatctcgctgcattgcaatctcaactg
tatagttcctatccttctccatcacaaaaagctccttttggtgttggtgaagtaagggaa
cacaaacataaatcatctcatagaagtcgaaagaaccgaggcatctcccaacagaactcg
gatttggctagccagaaaagtgaaagtgggttgcagtttagatcaaagtacatgacttca
gaagagatagagagtattctcaagatgcagcattccaattctcacagtagtgacccttat
gttaatgactattaccaccaagctcggcttgccaaaaagtcagctggatcaagaacaaag
cctcctcagttgtatccttctcatttgaaggatcaccaatcccggtcccgtaatagtagt
tcagatcagcaaccacaagttcatgtggatgctcttggaaagattacacttccttttatt
tccaggccacgagccttactcgaggttgactctccgcctagctctggtgatggaaggtct
ggtcataagggatctgaaaagcatctggaagatgagcctcttgttgcagctagggtcact
attgaagatgcttttggagttcttattgatatagttgacattgataggactctccaattc
aacaggccacaagatggaggagctcagctcaagagaaaacgacagatcctgcttgaagga
ttagcaacttcacttcaacttgttgatcccttcagcaaaacaggccagaaaacaggatta
accgccaaggatgatattgtctttctacgcatagctacacttcccaagggtcggaaactg
ctcacaaagtatctacagcttcttgtccctggtactgagattgctcgtgttgtctgtatg
gctgtattccgccacctcaggtttctctttggtggtttaccgtcagatagccttgcagca
gagacaatagctaatctagctaaagcagttacggtttgtgttcaagcaatggacctccga
gcactgagtgcttgtcttgcagctgttgtttgttcttcagaacagccaccactccgtccc
ataggaagcccttcaggtgatggagcatcagttgtgttggtatctctccttgagagagct
gctgaagtagtagtagtagtggcggcggttccacgtgtcaacaacaactcgaatgatgga
ctctggagagcttcgtttgatgaattcttctctcttcttactaaatattgcaggagcaag
tatgagatgatccatggtcagaaccaggataatgcatctgatgtgttggagctagctata
aagagggagatgcctgctgagcttctacgtgcgagtctacgtcatactaatgaagaccag
aggaatttcttactaaactttggtcgtagagcatcgccagttaacgagtcaacaacaaca
acccgcgcaagtggtggtcagatcaagtcagaatttgtgaggggttaa
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