Camelina sativa (false flax): 104719079
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Entry
104719079 CDS
T05044
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00450
Selenocompound metabolism
csat00970
Aminoacyl-tRNA biosynthesis
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
104719079
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104719079
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csat01007
]
104719079
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104719079
Enzymes [BR:
csat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
104719079
Amino acid related enzymes [BR:
csat01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104719079
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104719079
Prokaryotic type
Other AARSs
104719079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
104719079
NCBI-ProteinID:
XP_010435225
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All DBs
Position
10:15743820..15749532
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AA seq
799 aa
AA seq
DB search
MEDGGKSDVPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAI
YICGTDEYGTATETKALEENCTPKEICDKYHAIHNEVYDWFDISFDKFGRTSTPEQTEVC
QAIFKKLWENKWLSENTMKQLYCDTCKKFLADRLVEGSCPFDGCNYGSARGDQCENCGKL
LDPTELKDPKCKVCQNTPRIRDTDHLFIELPLLKDKLEEYIKETSVAGSWSQNAIQTTNA
WLRDGLRQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPE
NVELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEDGKFSKSKGVGVFG
NDVKDTNIPVEVWRYYLLTNRPEVSDTSFSWKDLQAKLNGELLSNLGNFVNRVLSFIAKP
ESSGYGSVIPDAPGAESHPLTISLAEKVEKLVAEYVEAMEKVKLKQGLKTAMLISNEGNF
YLQANQFWKLYKDDKPSCAIVIRTAAGLVHLIAQLLEPFIPSFSCEVFKQLNLPPHFSLS
DERGEVLLASRPWEILPPSHRIGTPQPLFKELVDEEVQQYREKFAGSQADRRARDEAANL
TDQLNKTKLSDAKKQKASSSKSGGKPKPQPATDREVTMARLDIRVGKILKAERHPRADAL
YVEEIDVGGGEIRTVVSGLVNYIHLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSD
GSKVELVEPPESAIIGERVTFPGFEGEPDDLLNPKKKIFETLAVDLHTNENLVACYKDVP
FTTSAGVCKVSSISNGPVR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcggaaagagcgacgtccccaagttaccaatccctggaaagagaaatata
ctaatcaccagtgctcttccttacgtcaacaacgttcctcatctcggaaacatcattgga
tgtgttctgagcgctgatgtgtatgctagatactgtcgtctccgtggctataatgcgata
tacatatgtgggactgatgaatatgggactgcaactgagaccaaagctttggaggagaat
tgcacccccaaggaaatctgtgacaagtaccatgccattcataatgaagtttatgactgg
tttgatataagttttgacaagtttgggcgaacttcaactccagaacagactgaagtgtgc
caagcaattttcaagaagttgtgggaaaacaagtggctttctgagaacaccatgaagcag
ctttattgcgatacatgcaagaagttcttagctgaccggcttgttgagggttcttgtccg
tttgacgggtgcaattatggttctgctcgtggagatcagtgcgaaaattgtggaaaactc
ctggatcctactgaacttaaagatccgaagtgcaaggtctgtcaaaatacaccccgaatt
cgcgacacagaccacctgtttattgagcttccgttgctgaaagataagttggaagagtat
attaaggagacatctgttgctggatcttggagtcaaaatgctattcaaacaacaaatgca
tggcttagggatgggcttagacagagatgcattacaagggatcttaaatggggagtacct
gtcccacatgagaaatataaggagaaagtcttctatgtttggtttgatgctcctattgga
tacgtctcaataacgtcatgctacacatctgaatgggagaagtggtggaagaatcctgag
aatgtggagctttatcagtttatggggaaagacaatgtgccatttcacactgtgatgttt
ccctctacgcagcttggaaccggggaaaattggacactgatgaagacaatcagtgtgacc
gaatatttaaactatgaagatggaaagttctccaagagtaaaggtgttggagtgtttggt
aatgatgtaaaagatacaaatatacctgttgaagtatggagatactacttgctgaccaac
aggcctgaggtgtctgacacatcattttcatggaaagatttgcaagcaaaactgaatggc
gagttgttaagcaacctaggcaactttgttaatcgagttctgagtttcatagcaaagccg
gaaagttcaggttatgggtctgtcattcctgatgctcctggtgctgagtctcatccttta
acaatatcactggctgaaaaggttgaaaagttggtggcagagtatgttgaagccatggaa
aaggttaagctcaagcagggcctgaaaactgccatgctgatttcaaatgaagggaacttt
tacttacaagcaaaccaattctggaaactctacaaggacgataaaccttcttgtgcaatt
gttataagaactgctgctggtttagtacaccttattgctcaattgttagaacctttcata
ccatccttttcttgtgaggtatttaaacaactaaatttgcctccacatttttctctctcc
gatgagaggggggaggtattactagcaagtagaccatgggagattctacctcccagccac
aggataggcacccctcaacctttgttcaaggagttggttgacgaagaagtgcaacagtac
agagaaaagtttgctggaagtcaggctgatagacgtgctagggatgaagcagcaaacttg
acagatcaacttaataaaacaaaactttcagatgccaagaaacaaaaagcatcatcatca
aaaagcggaggaaaacccaaacctcaaccggctactgatcgtgaagtaactatggcaaga
cttgatatccgagttggtaaaattttgaaggctgagagacatcctagggcagatgcattg
tatgtggaagaaattgatgttgggggaggtgaaatccgcactgtggttagtggactggtc
aactatatacatcttgaggaaatgcagaaccgtatggtttgtgttctttgcaacttgaag
ccggcgaagatgagggatattgtgtcgcaagcaatggttcttgcagcttccagtagtgat
ggcagcaaggtggagttagttgagccccctgaatctgcaattattggtgagcgagttaca
tttcccgggtttgaaggcgagccagacgatctcttaaacccaaagaagaaaatatttgag
acactcgcggtggatctacacacaaatgagaatctagttgcttgctacaaagatgtgccc
ttcactacatctgcaggtgtatgcaaagtttcatccatcagcaatggcccggtccggtaa
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