Camelina sativa (false flax): 104719084
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Entry
104719084 CDS
T05044
Name
(RefSeq) probable pectate lyase 15
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104719084
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104719084
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF2448
NosD
Motif
Other DBs
NCBI-GeneID:
104719084
NCBI-ProteinID:
XP_010435229
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Position
10:complement(15852612..15857576)
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AA seq
461 aa
AA seq
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MASSSQKLISVCFAVFVVLALTVTILWKLETEELQSLSSSKMAAIRKLKTEELQSSNSSS
VAATRLRGEEDQQHAVAVDPEKVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWR
CDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPTDEDVVNPKPGTLRHAVIQEEPL
WIVFKRDMVIELKQELIMNSFKTIDGRGANVHIANGACITIQFITNVIIHGLHIHDCKPT
GNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNN
HFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
YAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAYFRS
SGEEASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttctcagaaactgatcagtgtttgcttcgccgtgttcgtcgtcttagct
ctaacggtgacgattctctggaagctggaaacagaggagttacagagcttaagcagctca
aaaatggcggcgataaggaagctgaaaacagaggagttacagagctcaaacagctcatca
gtggcggcgacaaggcttagaggtgaagaagatcaacaacacgcggttgctgttgatcca
gagaaggttgctgatgaagtcgctaagcttgttcagatgagtgaacagaacaggacagca
aggaggaagctaggattcttctcctgtggaactggtaatccaattgatgactgctggcgt
tgtgaccctaactggcacaagaaccgtaaacgcctcgcggattgtgggatcggttttgga
aggaacgcaattggtggtcgtgatggacgcttctacgttgttactgaccccactgatgaa
gacgttgttaaccccaaaccgggaactctacgccatgctgtcatccaggaggagcctctt
tggatcgtcttcaagagggatatggtgatagagctgaaacaggagctgatcatgaacagt
ttcaagaccattgatggccgtggtgccaacgttcatatagccaatggtgcttgcatcacc
atccagtttatcaccaatgtcatcattcatggtcttcacattcatgattgcaagcctact
ggaaatgcaatggttagaagctccccatctcactttggttggaggacaatggctgatggt
gatgcagtctccattttcggatcgtctcatatctggattgatcataactccctttctcac
tgtgctgatggccttgttgatgctgtcatggggtctactgctattactgtttccaataac
cactttacccatcacaatgaggtgatgttgcttggtcacagtgactcgtacacaaaagac
aagctgatgcaagtgaccattgcttacaaccatttcggtgaaggacttgttcagagaatg
ccaaggtgcaggcatgggtatttccatgtggttaacaacgactacactcactgggagatg
tacgccatcggtgggagtgcagaaccaaccatcaacagtcaaggaaacagatatgctgct
cccatggaccgcttcgccaaggaggtgacgaaaagagtggagacagatgcaagtgagtgg
aagaagtggaattggaggtcggaaggagaccttctactgaatggagcatacttcaggtca
tcaggagaagaagcgtctgctagctatggacgagcctcaagcttagcagctaaaccatca
tctatggtcgacactattacctctactgcaggagcactaggttgccgtaagggcagacct
tgctag
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