Camelina sativa (false flax): 104719322
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Entry
104719322 CDS
T05044
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104719322
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104719322
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
FLYWCH
Motif
Other DBs
NCBI-GeneID:
104719322
NCBI-ProteinID:
XP_010435519
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Position
10:complement(19093039..19099723)
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AA seq
346 aa
AA seq
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MERVQSTNLHAYILIAIALFLSLSRPSHATKQFNVLSFGAKPNGMVDSAPAFVKAWDAAC
GSTDAAVIYVPKGRYLVSPVRFNGVGCKSLNIVFRIDGTLVGSEDYMFLGKEANWLSFER
VSGVSVIGGSLDAKGPSLWSCKASSSNNCPAGATTMSFVECSRINVKGVLSLNSQMFHIV
INRCRDVKLDDIQIVADGKSPNTNGIHVQLSTNVEIRNASIKTGDDCISIGPGTKNLWVE
RVTCGPGHGISIGSLGKDREEEGVQNWTVKNESGVRINDVIFYQGIRGTSATKIAVKLDC
SSKTPCTRIRMKDINLRYANEAAQSSCVNVLGDSTLGNLVKPQACF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggagagggtccaaagtacaaatctacacgcttacatccttattgcaatagccctcttc
ttgtctttatcaagaccatctcatgcaacaaaacaattcaatgtgttgagcttcggagct
aaacctaacggtatggttgactcagctccagcttttgtcaaggcatgggatgcagcgtgc
gggtccactgatgcagccgttatatacgtgccaaaaggacggtatctggttagccctgtt
cgtttcaatggtgtgggttgcaagagtcttaatattgtcttcaggatcgatggtactctt
gttggttcggaggattacatgtttcttgggaaagaagcaaactggctcagctttgaacga
gtcagtggagtttccgttatcggtggttctctcgacgccaagggaccctcgttatggtct
tgcaaagcttcatctagcaacaactgtccagctggtgctacgacaatgagttttgtggag
tgcagtagaatcaatgtgaagggagtactatcactgaacagccaaatgttccacattgtc
atcaaccgatgccgtgatgttaagctcgatgatattcaaatcgtggctgatggaaaaagt
cctaacacaaatggcatccatgttcagctatcgaccaatgttgagatccgcaacgcttcc
atcaaaaccggtgacgactgtatctccattggccctggaaccaagaacttgtgggtcgaa
cgagtcacatgtggccctggtcatggaatcagcattgggagcttgggaaaggatagagaa
gaagaaggagttcaaaattggacggtgaagaatgaatcgggagtgaggataaacgatgta
attttttatcaaggcataagaggaacatcagctacgaaaattgctgtaaaattggactgc
agttctaaaactccatgcacacgtataagaatgaaggacattaatttgagatatgctaat
gaagctgcccaatcttcatgtgtcaatgtccttggtgacagtactcttggtaatttggtc
aaaccccaagcctgcttctaa
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