Camelina sativa (false flax): 104719364
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Entry
104719364 CDS
T05044
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104719364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104719364
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104719364
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104719364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
Band_3_cyto
ECR1_N
Motif
Other DBs
NCBI-GeneID:
104719364
NCBI-ProteinID:
XP_019086051
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All DBs
Position
10:19524650..19526598
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AA seq
311 aa
AA seq
DB search
MGKLREVEILLNQTQKVRFERAMERLQSLSSTTNNSVIVADSIPFNHDEAFLKGHGTSLV
DGELLTTVCGVVNHVDKLVYVRTLRARYKPEVGDIVLLRYSFVAQRQSRWRVDLNSTQDG
LLKLSSMNMPDAVQKRNTSVDELNMRNILAEDDVVCAQVGESQRDGSLLARSNKYGKLHK
GQLLKVDPYLVRRSNLHFHFIESLGIDLILVRNGFIWVGEHTQSNDPMVVDDEIISSKTR
QSILRIGNAIRVLSTLGFTLTLAVIMETFDLSNMENVQIHDMLGSEFHVWSQRGKLKEEH
VHSKKNVKALI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactaagggaggtagagatactattgaaccagacgcagaaggtcagatttgag
agagctatggagcggctacaatctctgtcgtcgacgacaaacaattctgtcatcgttgcc
gactccatccccttcaaccacgatgaagccttccttaagggacacggaacttccttggtc
gacggtgagttgctgacgacggtctgtggagtggtgaatcacgtggacaagctcgtctat
gtacgcaccttgcgagccaggtacaagcctgaggttggggatattgtgttattgaggtat
agttttgttgctcaaagacaaagccgttggagagtggatcttaactctactcaagatgga
ttactgaagctttcttccatgaacatgcctgatgctgttcagaagcgaaacacatctgtg
gatgaactcaatatgcggaatattttggcagaagatgatgtagtttgtgcccaagtaggt
gaatctcagcgtgatggcagcctactagctagaagtaacaagtatgggaagctacacaag
ggacagcttctcaaggttgatccttacttggttaggagaagcaaccttcactttcatttc
attgaaagtcttgggatcgatttgattctcgtccgcaatggcttcatttgggtcggggaa
cacacccaatccaatgatcctatggttgtggatgacgagatcatctcatcaaagactcga
caaagcattctcagaatcggtaatgcgatacgggtcttgtctactctaggcttcactctc
actctagcagtgatcatggaaacttttgacttgagcaacatggagaatgtccaaatacat
gacatgcttggatcagagttccacgtctggtcacagagagggaagctgaaagaagaacac
gtgcatagtaagaaaaacgtgaaagccctcatctaa
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