Camelina sativa (false flax): 104719406
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Entry
104719406 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104719406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104719406
03009 Ribosome biogenesis [BR:
csat03009
]
104719406
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104719406
Spliceosome [BR:
csat03041
]
Complex A
U1 snRNP components
U1 related factors
104719406
Complex B
104719406
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Helicases
104719406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
SNF2-rel_dom
SWI2_SNF2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104719406
NCBI-ProteinID:
XP_010435631
LinkDB
All DBs
Position
10:complement(19960485..19964586)
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AA seq
636 aa
AA seq
DB search
MAATANAPSTVRYAPEDHSLPKPWKGLVDDGTGFLYYWNPETNVTQYERPAPSHPPKLPP
VSVSSSVQVHPTPNGAAYAPPRKADDKYTRPSEHGPKIDSSSRFSESGRSGPPYSNGAAN
GVGNPAYGATSARGPSPSSAPRSELSPEAYSRRHEITVSGGQVPPPIMSFEATGFPPELL
REVLSAGFSAPTPIQAQSWPIAIQGRDIVAIAKTGSGKTLGYLIPGFMHLQRIRNDSRAG
PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGADIVVATPGR
LNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVR
KIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFC
STKRMCDQLTRNITRQFGAAAIHGDKSQPERDHVLNQFRSGRTPVLVATDVAARGLDVKD
IRAVVNYDFPNGVEDYVHRIGRTGRAGATGHAFTFFGDQDSKHASDLIKILEGANQQVPQ
QIREMATRGGGGMNKYSRWGPPSGGRGRGGDSGYGGRGGDSGYGGRGGFGSRDRSSNGWG
RERERSRSPERFNRAPPPSSTGSPPRSFHESMMKHR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccgctaatgctccttctactgtccgttatgcacctgaggatcactctctt
cctaagccttggaaaggccttgtcgatgatggcactggcttcttgtactattggaatcct
gagaccaatgttactcagtacgagagacctgctccctctcatcctcccaagcttcctccc
gtctctgttagctcttccgttcaggttcaccctactcctaacggtgccgcctatgctcct
cctcgcaaggctgatgataagtatactagaccctctgaacatggccctaagattgactct
tcctccaggtttagtgagagtggcaggagtggacccccttattcgaatggagctgctaac
ggtgttgggaatcctgcatatggtgcaacatctgccagaggtccttctccttcatcagct
cccagaagtgaactgtcccctgaggcctactcccgccgtcatgagattactgtcagtggg
ggccaagtaccaccacctataatgtcctttgaagctactggattccctcctgagcttctg
cgggaggtactcagtgcaggtttctctgctccaactccaattcaagctcagtcatggcca
attgctattcaaggtagggacattgtagccattgctaaaactggctcaggaaaaactttg
ggttacttgattcctgggtttatgcatcttcaacgcatccgaaatgattcgcgcgcgggc
ccaacaatcttggtgttgtctccaacgagggagctggccacacaaatccaagaagaagct
gttaaatttgggaggtcatcaagaatttcgtgtacctgtttgtatggtggtgcgccaaag
ggacctcagctgagggatttagatagaggagcagatatcgtggttgcaactcctgggaga
ttgaatgatatccttgaaatgaggagaattagtctgcgtcaaatatcttaccttgtgcta
gatgaggcagataggatgttggacatgggttttgaaccacagataaggaagattgtgaaa
gaaattcccactaagcgtcaaacccttatgtacacagctacgtggccaaagggagttagg
aaaattgcagctgacttacttgttaaccctgctcaagtcaacattggcaacgttgacgag
cttgtggctaacaagtcaatcacacagcatattgaagtggtagcaccaatggagaaacag
aggagattagagcagatcttgcggtctcaggaaccaggctcaaaggtgatcatattctgc
tcgaccaaaaggatgtgtgatcaactaacacgcaatatcacccgccaatttggagctgct
gctatacatggagacaagtcccagcctgagagagaccatgttcttaatcaattccgcagt
ggtaggactccggttcttgttgcaaccgatgttgctgctcgtggactggacgttaaggac
atcagggcggtcgtaaactatgattttcccaatggagtggaagactatgttcatagaatc
ggaagaacaggaagagctggagcgactggtcatgcattcacattctttggtgatcaagat
tcaaaacatgcttcagatctgatcaagatcttggaaggagcaaaccagcaagttccgcaa
cagatccgtgaaatggctacacgtggtggtggtggaatgaataaatacagtcgctggggt
cccccttctggaggccgtggtcgtggtggcgactctggttatggtggcagaggtggcgat
tctggttatggtggcagaggtggctttggctcgcgtgacagaagcagcaacggatgggga
agggagcgtgaaaggagccgtagccctgagagattcaacagagctccaccaccgtcttcc
accggatcgcctcctcgcagcttccacgagtccatgatgaaacacagatga
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