Camelina sativa (false flax): 104719662
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Entry
104719662 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104719662
03460 Fanconi anemia pathway
104719662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104719662
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104719662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104719662
NCBI-ProteinID:
XP_010435920
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Position
2:7581923..7586067
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AA seq
738 aa
AA seq
DB search
MIDDGSSLTVEMEEEDSPATAFAPREPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVEN
SLDADSTSISVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTKYEDLFSLSSMG
FRGEALASMTYVAHVTVTTITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYN
MIARRKTLQNSADDYGKIVDLLSRMAIHHNNVSFSCRKHGAVKADVHSVVSPSRLDSIRS
VYGVSVAKNLMKVEVSSCDPSGCTFDMEGFISNSNYVAKKTILVLFINDRLVECSALKRA
IEIVYAATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVELKLR
SANDTRTFQEQKVEYIQSTLTSSRSDPPVSPLLSGQKTQKVPVNKMVRTDSSDPAGRLHA
FLQPKSHNLPDKVSSLSVVRSIVRQRRNPKETADLSSVQELIAGVDSCCHPGLLETVRNC
TYVGMADDVFALVQYNTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSELILL
ALKEEDLDLGNESNDDLKERIADMNTDLLKEKTEMLDEYFSINIDSNGNLSRLPVILDQY
TPEMDRVPEFLLCLGNDVEWEDEKTCFQGVSAAIGNFYAMHPPLLPNPSGDGIQFYTKRS
ESSQDNTELGGNVDMEENLDQDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPAAMASNG
TFVKVASLEKLYKIFERC
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgacggttcgtctcttacggtggagatggaggaggaagattctccggcgacg
gcgtttgcacctagagagccaccgaagattcaacgcctagaagagtccgtggtcaaccgt
atcgcagctggtgaagtaatccagcgtccagtttcagcggtgaaggagctcgttgagaac
agcctcgacgccgattcaacttccataagcgtcgttgttaaggacggtggcttgaagctc
attcaagtctcagacgacggtcacggtattaggcgtgaagatttgccgatactatgcgag
agacatacgacatcgaagctaactaagtatgaggatttgttctctctgagctcaatggga
ttcagaggagaggcattggctagtatgacttatgttgctcatgttactgtaactacaatt
actaaaggccagattcatggttacagagtgtcttatagagatggtgtcatggagcatgaa
ccaaaggcgtgtgctgctgtcaaaggaactcagataatggtggagaatttgttctacaat
atgattgctagaaggaagacacttcaaaattctgctgatgattatgggaaaatagtagac
ttgctgagtcgtatggccattcatcacaataatgtcagcttttcttgtcgaaagcatggg
gctgtcaaggcggatgttcactcagtcgtgtcgccttcaaggcttgattccatcaggtct
gtttatggggtatcagttgcaaagaacttgatgaaagtagaagtctcctcttgtgacccc
tctggttgtacttttgatatggaaggtttcatatccaattcaaactatgttgctaagaag
accatattggttcttttcattaatgatagattggtggaatgctctgccttaaaaagagcc
attgagattgtttatgctgcaacgttgccaaaagcatcgaaaccttttgtctacatgtca
atcaatttgccacgggaacatgttgatatcaatattcatccaacaaagaaagaggttagc
cttcttaaccaggaaatcattatcgagatgattcagtcagaggttgaattaaaactgaga
agtgcaaatgatactaggacttttcaagagcagaaagtggaatacattcaatctacgtta
acatcctcgagaagtgatcctccagtttctccgttgctttctggacaaaaaacacagaaa
gttcctgtgaataaaatggtgagaacggattcatcagatccagctggacggttacatgct
tttttgcaacccaaatcccataatctccctgacaaggtttctagtttgagtgtagtaagg
tctattgtaaggcaaagacgaaacccaaaggaaactgcggatctttctagtgtccaggaa
ctcattgctggagttgacagctgctgccatccaggtctgctggagactgttaggaattgc
acatatgttggaatggcagatgatgtttttgctttagttcagtataacacccatctatat
ctagcaaatgtggtgaacctcagcaaagagctcatgtatcagcaaactcttcgtcgtttt
gctcattttaatgctatacagcttagcgatccagcccctttgtcggagttaatattgttg
gcattgaaagaggaggatctagatctaggaaatgagagtaatgacgatctgaaagaaaga
atcgctgatatgaatacagatcttctgaaggaaaaaacggaaatgttagatgagtatttc
agcattaacattgactccaatggaaatttgtcacggcttcctgtcatactcgaccagtat
acacctgaaatggaccgagttcccgaatttttactatgcttgggaaatgatgttgagtgg
gaagatgagaagacttgcttccaaggagtttctgcagctattgggaacttttacgcgatg
catcctcctcttttgccaaacccatcgggtgacggtattcagttctatactaagagaagt
gagagctctcaggataatacagagttagggggtaacgttgacatggaagaaaatcttgat
caagaccttctttcagatgctgaaaacgcttgggcacaacgtgaatggtctatccaacac
gtgttgtttccgtctatgagattgttcttgaagccaccagccgccatggcttcaaatggg
acttttgtcaaggtagcatcccttgaaaagctgtacaagatattcgaacgatgctaa
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