KEGG T05044: 104719711

Camelina sativa (false flax): 104719711

Entry

104719711         CDS       T05044

Name

(RefSeq) heterogeneous nuclear ribonucleoprotein A2 homolog 1 isoform X2

K12741

heterogeneous nuclear ribonucleoprotein A1/A3

Organism

csat Camelina sativa (false flax)

Pathway

csat03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104719711
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104719711
   03041 Spliceosome [BR:csat03041]
    104719711
Messenger RNA biogenesis [BR:csat03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104719711
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104719711
Spliceosome [BR:csat03041]
Common components
  Common spliceosomal components
   hnRNP proteins
    104719711

SSDB

Motif

Pfam:

RRM_1 RRM_7 RRM_PARP14_3 RRM_Nup35 SF3a60_bindingd

Other DBs

NCBI-GeneID:

104719711

NCBI-ProteinID:

XP_010435977

UniProt:

A0ABM0U560

LinkDB

Position

10:23767708..23771827

AA seq 387 aa
MFCGICRKIFVGGLARETTSAEFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADVSV
VDKVMEDNHIIIGKQVEIKRTIPRGSVSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGE
LKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVT
TPSKRFGDSRSNFGGGYGDGYGGGHGGGYGGPGGPYKSGGAGYGGGRSGGYGGYGGEFGG
YGGGGYGGGVGPYRGEPALGYSGRYGGGGGGGYNRGGYGMGGGAGYGGGPGDMYGPPYGE
PGGGYGGPSGSYGGGYGSSGIGGYGGGMGAAGGGYRGGGYDMGGIGGGGGGGYNGGGGSG
GGSFYGGGGSRGGYGGGGSGRYHPYGR

NT seq 1164 nt +upstreamnt +downstreamnt
atgttttgtggaatttgtagaaagatatttgttggaggtttagccagggagacaacttca
gctgaattcgtcaagcattttgggaaatatggagagatcactgattctgtcattatgaag
gacaggaaaactggacagccccgagggtttgggtttgtcacatacgctgatgtctctgtg
gtcgacaaagttatggaggacaatcacattatcattgggaagcaggttgaaattaagcgg
acaataccaagaggatccgtgagctctaatgatttcaaaaccaagaagatatttgttggt
gggattccttcatctgtggatgatgatgagttcaaggaattctttatgcaatttggagag
ctgaaggaacatcagattatgcgtgatcattcaactggaagatcgcgtggctttgggttt
gttacatatgaaagtgaagatatggttgatcatctcttggcgaaagggaacagaattgag
ctctcagggactcaggttgagataaagaaggctgagccaaaaaaaccaaactcagttaca
accccgtcaaagcggtttggtgactctcgctctaactttggtggaggctatggggatggt
tatggtggcggacacggtggtggatatggtggtccaggtggtccttacaaatcaggtggt
gccggctatggaggtggccggtctggtggttatggaggatacggaggagaattcggtggg
tatggcggtggtggatacggtggtggcgtgggaccttatagaggagaaccagcacttgga
tattctggtcgttatggaggaggtggcggtggtggttacaacagaggtggttacggtatg
ggaggaggcgctgggtacggtggtggacctggtgatatgtatggcccgccatacggtgaa
cctggaggtgggtatggtggaccaagtggcagttatggaggcggttatggtagtagcggt
attggtgggtatgggggtggaatgggtgctgctggtggaggctatagaggtggtggctat
gacatgggtggaattggaggtggaggcggaggaggttacaatggcggtggaggaagcggg
ggaggctcgttttatggaggagggggaagtagaggcggatatggaggtggtggcagcgga
cggtaccatccttatggaaggtag

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