Camelina sativa (false flax): 104719872
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Entry
104719872 CDS
T05044
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f isoform X1
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03060
Protein export
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
104719872
04141 Protein processing in endoplasmic reticulum
104719872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
csat03110
]
104719872
04131 Membrane trafficking [BR:
csat04131
]
104719872
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104719872
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
104719872
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104719872
Membrane trafficking [BR:
csat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
104719872
Autophagy
ER-phagy
ER stress-related proteins
104719872
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104719872
Exosomal proteins of other body fluids (saliva and urine)
104719872
Exosomal proteins of colorectal cancer cells
104719872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Radial_spoke_3
FGGY_C
Hydantoinase_A
DUF7357
FtsA
Motif
Other DBs
NCBI-GeneID:
104719872
NCBI-ProteinID:
XP_010436160
UniProt:
A0ABM0UVK9
LinkDB
All DBs
Position
10:complement(25174378..25178596)
Genome browser
AA seq
668 aa
AA seq
DB search
MARSFGANGTAVLAIIFLGCLFAFSTAKEEATKLGSVIGIDLGTTYSCVGVYKNGHVEII
ANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDRKL
VPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPA
YFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSV
LTIDNGVFEVLSTNGDTHLGGEDFDHRIMEYFIKLIKKKHQKDISKDNKALGKLRRECER
AKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKS
QIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK
DILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSL
TKDCRLLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGR
LSQEEIDRMVKEAEEFAEEDKKVKERIDARNALETYVYNMKNQVNDKDKLADKLEGDEKE
KIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGAGGESTTEE
EDESHDEL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcgttcggagcaaacggcactgctgtgctggcgatcatcttcttaggatgt
ttatttgcgttttcaactgcaaaagaagaggccaccaagttgggatcagttatagggatt
gatcttggtaccacttactcttgtgtcggtgtttacaagaatggtcacgttgaaattatt
gccaacgaccaaggaaaccgtattacaccttcctgggttggtttcactgactctgagagg
ctcattggtgaggctgctaagaatcaggcggctgttaatccagagaggactatcttcgac
gtcaagagattgatcggccgaaaatttgaggacaaggaggtccaaaaggacaggaaactt
gtaccttaccagattgtgaacaaggacggtaagccatacattcaagtcaagatcaaggat
ggtgagactaaggttttcagtcctgaggagatcagtgctatgattctgactaagatgaag
gagacagccgaagcataccttggaaagaaaatcaaggacgctgttgttaccgttccagct
tacttcaacgatgcccaaaggcaagctaccaaggatgctggtgttattgctgggctcaat
gttgctagaatcatcaatgagcctactgctgctgctattgcctatggtctggataaaaag
ggtggtgagaagaacatccttgtctttgatcttggtggtggtacctttgatgtcagtgta
ttgaccattgataatggagtgttcgaggttctctccacgaatggtgacactcacttggga
ggtgaggactttgaccacaggatcatggagtacttcatcaagttgatcaagaagaagcac
cagaaggacatcagcaaggacaacaaggctcttggtaagctccgaagggaatgtgagagg
gcaaagagagctcttagtagccagcaccaagtccgtgtagagattgagtcactctttgat
ggtgttgatttctctgagccactcaccagagctcgtttcgaggagctgaacaatgacttg
ttcaggaagaccatgggaccagtgaagaaggccatggatgatgctggtctacagaagagc
cagatcgatgagatcgtccttgtcggtggaagcaccaggatcccaaaggttcagcaacta
ttgaaggacttctttgaaggtaaagagccaaacaagggtgtgaacccagatgaggctgtt
gcttatggtgctgctgttcagggtggtattttgagtggagaaggcggtgatgagaccaaa
gatattcttcttcttgatgtggcaccactcactttgggtattgagactgtaggaggagtg
atgacaaagctgatcccgagaaacacggttattccaaccaagaaatctcaagttttcaca
acgtaccaagaccagcagacaactgtctcaattcaggtctttgaaggtgaaagaagtctc
accaaggactgcaggctgctcgggaaattcgacctcaacggaatcccaccggccccaaga
ggaacccctcaaatcgaggtcacattcgaagtggacgccaatggtatcctgaacgtgaaa
gcagaggacaaggcgagtggtaaatcagagaagattacaatcacaaacgagaagggtcgt
ctgagccaagaagagattgaccggatggtgaaggaggcagaggagtttgcagaggaagac
aagaaggtgaaggagaggatcgacgccaggaatgcgttggagacgtacgtgtacaacatg
aaaaaccaagtgaacgacaaggacaagcttgcagacaaattggaaggggatgagaaggag
aagatcgaagcagcaaccaaagaggccttggaatggctcgacgagaaccaaaactcagag
aaagaagagtacgatgagaagctcaaggaggtagaagcagtgtgtaacccaatcatcacg
gcagtataccagagatcaggcggagcaccaggtgcaggaggagaatcaacgactgaggag
gaagatgagtctcatgatgaactctag
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