Camelina sativa (false flax): 104719931
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Entry
104719931 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104719931
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104719931
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104719931
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
104719931
NCBI-ProteinID:
XP_010436217
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Position
10:complement(1004246..1010919)
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AA seq
741 aa
AA seq
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MEHGAPEMKAGRFMTKLFVLIFFLQGVHSQSSSRNKLNIAKPGQTQASLPVTLKKVSRNQ
VIVDNGIIQVTFSNPQGLITGIKYNGFNNVLNDQIENRGYWDVVWYEPGQIPLTDYLVGT
KFDIVNHTSEHVEISFSRTWSISQRGSVAPLNVDKRYIIRSGVSGVHMYAVLERLKGWPE
VDMDQTRIVFKLNTTKFDFMAVSDDQQKIMPFEADRDIRNGRASPLAYKEAVHLINPQNH
MLKGQVDDKYMYSMEGKDNKVHGWISSDRHVGFWMITPSDEFRVCGPVKQDLTSHMGPTI
LSMFTSVHYAGKDMNTTYKSKEPWKKVFGPVFVYLNSASSRNLLWTDAKRQMVSEVQSWP
YDFVNSVDYPLRHQRGTVKGQFFVKDRYNNKKTNLFGQFAFVGLALPGKAGSWQTENKGY
QFWTRADNIGMFTIANVRPGNYSLYAWVSGFIGDYKYERDITITPGEEINVGPIVYEPPR
NGPTLWEIGEPDRTAAEFYIPDPDPTLLTKLFLSNSNSEDRFRQYGLWDRYSVLYPRNDL
VYIAGVSDYKKDWFYAHVNRKARNGTYQATTWQIKFNLNAVTEIGSYTLRIALASATTVN
LMVRVNEANSKPVFISGLIGRDNAIARHGIHGLYKLYNIDIHGKFLRVGYNTIYLIHGRN
KSDSFSGVMYDYXSFNMFTSVHYAGKDMNTTYKSKEPWKKVFGPVFVYLNSASSRNLLWT
DAKRQIAGYSAYSCPLIVRKQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggaacacggagctccggaaatgaaggctggtcggttcatgactaaacttttcgtactc
atcttttttcttcaaggtgttcattctcaatcatcatcacgaaacaaattaaacattgca
aaaccgggccaaacacaagcatctctcccggtcacgcttaagaaagttagtcgtaaccaa
gtgatcgttgataacggtatcatccaagttaccttctcaaatccacaaggcttaataact
ggaatcaagtacaatggctttaacaatgtgttgaacgaccaaatcgaaaatcgcgggtat
tgggacgttgtatggtatgaaccaggacaaataccgttaaccgattatttagtagggaca
aaattcgatattgtaaatcatacaagtgagcatgtcgaaatttcattttcgagaacatgg
agcatctctcaacggggctcagtagccccattaaacgtagacaaacgatatattattcga
agtggtgtatcgggagtacacatgtacgctgtgttggagaggttgaaaggttggcctgaa
gtggacatggaccaaaccagaatcgtcttcaaacttaacacaacaaaattcgatttcatg
gctgtatcggatgatcagcaaaaaatcatgcctttcgaagcagatcgagatatccgcaat
ggtcgtgctagtccattggcttacaaagaagctgttcatttgataaatccgcaaaatcat
atgcttaaagggcaggtagacgataagtacatgtactcaatggaaggcaaagacaacaaa
gtacacggttggatatcgtcagaccgacatgttgggttctggatgattactcccagcgat
gagttccgtgtctgtggccccgtcaaacaagatcttacttctcatatgggtcccaccatt
ctctctatgttcacaagtgtacactacgcgggaaaagatatgaacacaacatataaaagc
aaggagccgtggaagaaggtgtttggtcctgtttttgtttatctcaactctgcctcttct
cgtaatcttctttggaccgatgctaaacgacagatggtttccgaggtccaaagctggcct
tatgatttcgtgaattcagtagattaccctctccgtcaccaaagaggaacagttaaaggt
caattctttgtcaaagacaggtacaacaataagaagacaaacttattcgggcaatttgct
tttgtgggattagcattacctggtaaagctggttcatggcaaaccgaaaacaagggatat
caattttggacacgagcagacaatattgggatgttcacaatagcgaatgtgcgacctggg
aattatagtctctacgcgtgggtttctggatttatcggtgactataaatacgaacgtgac
attaccatcacaccaggtgaggagataaacgtaggacccatagtgtacgagccaccgagg
aacggtccaacactctgggagatcggagaaccggatcgaaccgccgcagagttctatatc
ccagatccggacccaacccttttgaccaaactctttcttagtaactcaaattctgaagac
agatttagacaatatggtctatgggatcgttacagtgttctgtatccacgaaacgatctt
gtttatattgctggagtgagtgactataaaaaagactggttctatgcccatgtcaacagg
aaagctagaaacgggacatatcaagcaacgacatggcaaattaagttcaatttaaatgca
gtgactgaaattggaagctacacacttcgaatagctttggcttcagccacaactgttaat
ctaatggttcgagtcaacgaagctaattccaaacctgtttttatctctgggctaataggt
cgggataacgctatcgcgaggcatgggattcatgggttgtacaaattgtacaatatcgat
atccatggaaagtttcttagggttggttataatacgatttatcttattcacggtcggaac
aaatctgattctttttcaggtgtgatgtatgattatcnctcttttaatatgttcacaagt
gtacactacgcgggaaaagatatgaacacaacatataaaagcaaggagccgtggaagaag
gtgtttggtcctgtttttgtttatctcaactctgcctcttctcgtaatcttctttggacc
gatgctaaacgacagatagctggctactcagcttactcttgtcccttaattgttcgaaag
caatag
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