Camelina sativa (false flax): 104719951
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Entry
104719951 CDS
T05044
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104719951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104719951
Spliceosome [BR:
csat03041
]
Complex C
Other components
Step II factors
104719951
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Milton
Motif
Other DBs
NCBI-GeneID:
104719951
NCBI-ProteinID:
XP_010436232
LinkDB
All DBs
Position
10:1555301..1562373
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AA seq
538 aa
AA seq
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MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLKSEKP
SLKHQKNWKVDSVGRKKIWYDRGAKIHQAEKYRKGGCKNCGAMTHDVKACMDRPRKIGAK
YTNMYIAPDEKIESFELDYDGKRDRWNGYDPSSYRHVVASYEAKDEARKKYLKEQKLKKL
EEKLNKNGGDGATSDGEEEDDELRVDEAKVDESKQTDFAKVEKRVRTTGGGSTGTVRNLR
IREDPAKYLLNLDLNSAHYDPKTRSMREDPLPDADPNDKFYLGDNHYRNSGQALDFKQLN
VHSWEAFDKGQDMHMQAAPSQAELLYRNFKAGKDKLKSQTKQTIMEKYGDAATRDEIPME
LLLGQSERQVEYDRAGRVIKGQEVVIIPKSKYEEDVHTNNHTSVWGSWWKDHQWGIQCCQ
QTIRNSYCTGSAGIEAAEASLDLMKANIARKEASEESPKKVEEKRMATWGTDTSEDLELN
EEALANALRKEDLSRKEEKNERKRKYNVEYTNDVTPEEMEAYRMKRVHHEDPRKDFLG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcttcagttgctttcaagtctagggaagatcataggaagcaaatagaatta
gaggaagctcgtaaagccgggcttgctcccgctgaggttgacgaggatggaaaagaaatc
aaccctcacattcctcagtatatgtcatctgctccatggtatctcaagtctgaaaaaccc
agtttgaagcatcaaaagaattggaaagttgattccgtcggtcgcaaaaagatatggtat
gatagaggtgcaaagatccatcaagccgagaaataccgtaagggagggtgtaaaaactgt
ggcgcaatgacgcacgatgtaaaagcatgtatggataggcctcgcaagattggagcaaaa
tacacaaacatgtacattgcacctgatgagaaaatcgagagctttgaattggactacgat
gggaagagggaccggtggaatggttatgacccttcatcttaccgtcatgtggtggctagt
tatgaagcaaaagatgaggcacgaaagaagtatctcaaggagcagaaacttaagaaacta
gaggaaaagcttaacaaaaacggtggtgatggtgcaaccagtgatggcgaggaagaagat
gacgagttaagagttgatgaagccaaggttgatgagagcaagcagacggattttgcaaag
gttgagaaacgtgttcgtacaactggtggtggtagcacaggaactgtaaggaatctgcgt
atcagagaagaccctgcaaaatacctactcaaccttgatctcaactctgctcattatgac
ccaaaaactcgatctatgcgtgaagatccacttccagatgcagatccaaatgataagttc
tatctgggagataatcactatagaaacagtggccaagctctagatttcaaacagctaaac
gttcattcatgggaagcatttgacaagggacaggacatgcatatgcaagcggctccatcc
caagctgaattgctctacaggaactttaaggctggaaaggacaaactcaagtctcagaca
aagcaaacaatcatggaaaagtatggggatgcagctacaagagatgaaattcctatggag
cttttgcttggccaaagcgaaagacaagttgagtatgacagagcagggagggttataaaa
ggccaagaggtggtaataattcccaaaagtaaatatgaagaagatgttcatactaacaat
cacacaagtgtttggggttcttggtggaaagatcaccaatgggggatacaatgttgccag
caaaccattcgcaacagctattgcactggttctgctggaatcgaagctgcagaggcgtcc
cttgatctgatgaaggctaacattgctcgcaaagaagcttctgaagagagcccaaagaag
gttgaagagaagagaatggccacatggggaaccgatacttctgaagatttggaattgaac
gaggaggcactagctaatgctcttagaaaggaggatttgagtaggaaggaagagaaaaac
gagaggaagcgcaaatacaatgtggaatacaccaacgatgtgactccagaagagatggaa
gcttacaggatgaagagagttcaccacgaggatccaaggaaagatttcctcggctga
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