Camelina sativa (false flax): 104719961
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Entry
104719961 CDS
T05044
Name
(RefSeq) probable transcription-associated protein 1
KO
K08874
transformation/transcription domain-associated protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104719961
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csat01001
]
104719961
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104719961
03036 Chromosome and associated proteins [BR:
csat03036
]
104719961
Protein kinases [BR:
csat01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104719961
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104719961
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104719961
STAGA complex
104719961
TFTC complex
104719961
TIP60 complex
104719961
SAGA complex
104719961
SLIK complex
104719961
NuA4 complex
104719961
Chromatin remodeling factors
ASTRA complex
104719961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tra1_ring
Tra1_central
FAT
Pox_J1
TPR_21
Motif
Other DBs
NCBI-GeneID:
104719961
NCBI-ProteinID:
XP_010436242
LinkDB
All DBs
Position
10:2022448..2041653
Genome browser
AA seq
3082 aa
AA seq
DB search
MSPIQNFEQHSRRLVEPDLPIQARLEMVVEVRDSLEITHTAEYLNFLKCYFRASSVILLQ
ITKPQFTDNLEHKLRNIVVEILNRLPHSEVLRPFVQDLLKVAMQVLTTDNEENGLICIRI
IFDLLRNFRPTLENEVQPFLDFVCKIYQNFRSTVCHFFDYVKMEEVKRVEISTPSDQSLS
ITAPSRNGQINPSTRSFRIVTESPLVVMFLFQLYSRLVQINIPNLLPLMVSAISIPGPEK
VSSHMKPQFIELKGAQVKTVSFLTYLLKSCAEYIRPHEESICKSIVNLLVTCSDSVSIRK
ELLVSLKHVLGTDFKRGLFPLIDTLLEERVLVGTGRACFESLRPLAYSLLAEIVHHVRAD
LSLSQLSRIIYLFSRNMHDSTLSLNIHTTCARLMLNLVEPIFEKGVDQHSMDEARILLGR
ILDAFVGKFNTFKRTIPQLLEEGDGKDQITLRSKLELPVQAVLNLQVPAEHSKEVNDCKN
LIKTLVMGMKTIIWSITHAHLPRPQGMHPQALASQSSASQVFKGMREDEVLKASGVLKSG
VHCLALFKDKDEEKEMLNLFSQILAIMEPRDLMDMFSVCMAELFECMIDNTQLVQIFATL
LQAPKVYKPFADVLINFLVSSKLDVLKNPDSAATKLVLHLFRCLFGAVSKAPSDFERILQ
PQVPIIMEVCMKNATEIENTLGYMQLLRIVFRGLAGCKFELLLRDLIPMLLPCLNILLTM
LEGPAGEDMRDLLLELSLTLPARLSSLLPYLPRLMRPLVSCLRGSDELVSLGLRTLEFWV
DSLNPDFLEPSMANVMSEVILALWSHLKPVPYPWGGKALQIVGKLGGRNRRFLKEPLTLE
CKDNPEHGLRLVLTFAPSTPFLVPMDKFINLAVAAVIQKNLTTDIYYKKQALKFLRVCLL
SQLNLPGCVTDEGQMTKQLSALLLSSFDSSWRRSESTEIKADLGVKTKTQLIAEKSIFKT
LLITIIASSSDPDLSDSDDDFVINICRHFAIILHGDCTSSYASTSTAPFGGSVSSTSSKP
NINWSTNLKHLDPLIFLDALVDVLADENRLHAKAALTALNVFVGKVNVETLCLFQVKIVR
GLVYVQKRLPIYASKEQDETSQVLMQILRVVNNVDGENSDARRQSFQGVVEYLATELFNP
NASITVRKNVQNCLALLASRTGSEVSELLEPLYQPLLQPLIMRPLRSKTIDQQVGTVTAL
NFCLALRPPLLKVTPELVNFLQEALQIAEADEAVWAVKLMSPKVLTSLNRLRTACIEILC
TTMAWADFRTQSHNELRAKIISMFFKSLTCRAPEIVTVAKDGLRQVINQQRMPKELLQSS
LRPILVNLAHTKNLNMPLLQGLARLLELLSNWFNVTLGGKLLEHLKNWLEPEKLAQSQKS
WKAGEEPKIAAAIIELFHLLPLAASKFLDELVTLTIDLEAALPPGQVYSEINSPYRLPLT
KFLNRYATLAVDYFLSRLSEPKYFRRFMYVIRSDAGQPLREELAKSPHKILSYKLESSNT
PLTKSNVASDAYFQGLYLIKTMVKLIPSWLQSNRTIFDALALLWKSHARTSRLQNEQELT
LVQVKESKWLVKCFLNYLRHEKSEMNVLFDVLSIFLFHSRIDYTFLREFYIIEVAEEYPP
KTKKAIVLHFLNLFQSKQLSHDHLVQAMQMLILPMLTHAFRNGQTWEVIDPSIVKTIVET
LLDPPEEVSTEYDEPLRIELLQLATLLLKYLQSDLVDHRKELIKFGWNHLKRDDSASKQW
AFVNVCHFLDAYQAPEKIILQVFVALLRTCQPENKMLVKQALDILMPALPKRLPLGDSRM
PIWIRYTKKILVEEGHSIPNLIHIFQLIVRHSDLFYSCRAQFVPQMVNSLSRLGLPYNTT
AENRRLAIELAGLVVSWERQRQNETKMVIDADATSEVSNGLHPSSSADPKRSTDGSSISE
DPSKRVKIEPGLQSLCVMSPGGASSIPNVETPGSATQPDEEFKPNAAMEELIINFLIRVA
VVIEPKDREANTMYKQALDFLSKALEVWPNANVKFNYLEKLLSSMPPSQSDPSTALAQGL
DVMNKVLEKQPHLFIKNNISQISQFLELSFKHKMFDAGKSLCSLLKMVFIAFPHDGASTP
PDIKLLYQKFSELIQKHVHPVTAPQVSGDDNSLGSISFVLVVLKTLAEVQKNFVDPYVLV
HILQRLSRDLGSAAGAHPRQSQRTDSDSAVTSSRQTADVGVVISNIKSVLELIDERVMLL
ADCKRPVTQILNTLLSEKGTDSSVLICVLDMLKRWAEDDFGKTSLSGSSGAFLTQKDIVS
FLQKLAQVDKQHFSSVALDEWDKAYLQLLYGLCADSTKYPLALRQEISLKVERHSMLGLR
ARDPDMRRKFFLLYHESLGKNLFARLQYIIQNQDWEAMGDVFWLKQGLDLLLAILIEEKP
ITLAPNSARVVPLLSSQNPGTHYQPPAMPEGPEEVGSMFDSIVMKHAQFLSAASKLQVAD
VVIPLRELAHTDANVAYHLWVLVFPIVWATLHKEEQKALAKPMISLLSKDYHKKQQGHRP
NVVQALLEGLQLSHPQPRMPSELIKYIGKTYNAWHLALTLLETHVMLFTNESRCAESLAE
LYRLLNEDDRRFGLWKNRSNTTESRAGLSMVQHGFWQRAQSLFYQAMVKATQGTYNNTVP
KAEMCLWEEQWLHCATQLGQWDALVDFGKSTENYEILLDSLWKAPDWAYLKDHVIPKAQV
EETPKLRLVQACFALHEKNANGVGDAENIVGKGVDLALEQWWQLPEMSLHARVPLLQQFQ
QLVEVQESSRIYVDITNGSKVPGNAAVGGQGNHYADLKDILETWRLRAPNEWDNMTIWYD
MLQWRNEMYNVVIDAFKDFITSNTQLHHLGYRDKAWNVNKLARIARKQGLYDVSVQILEK
MYGHSQMEVQEAFVKIKEQAKAHLETKGELATGLNLVNSTNLEFFLAKNKAEIFRLKGDF
HLKLNDTEGANIAYSNAITLFKNLPKGWISWGNYCEMAYQETQEEIWLEYAVSCFLQGIR
FGVSNSRSHMARVLYLLSFDTANEHVGRTFDKHLDQVPHWVWLSWIPQLLLSLQRTEAPH
CKLVLMKIAAVFPQALYYWLRT
NT seq
9246 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaattcagaattttgagcaacattctcgtcgtctcgtcgagcctgacctacct
attcaggctaggcttgagatggtggtggaggtcagggacagcctagagataacacatacg
gctgagtacttgaattttcttaaatgttacttccgggcatcttcagtgattcttcttcag
attactaagccacagttcactgataatcttgagcacaaactacgcaacatcgtggttgag
atcctcaatcgtctaccacatagcgaggttcttcgtccctttgttcaagacctcttgaag
gttgctatgcaggtgctcaccactgataatgaagagaatgggttaatctgcattcgcatc
atctttgatcttcttaggaactttaggccgactttagaaaatgaggttcaaccattcttg
gactttgtctgcaagatttaccaaaacttcagatcaactgtttgccattttttcgactat
gtcaaaatggaagaagtgaaacgtgtggagatctctacaccatctgatcagtcgctctcc
attactgcaccttccagaaatgggcagattaaccctagtactcgttcattcagaattgtc
acagagagccccctcgtcgttatgtttctttttcagctgtatagcagacttgttcagatc
aatatacctaatttgttgcccctgatggtttctgctatatcgatccctggccctgagaaa
gtttcttcacatatgaagcctcagttcatcgaactgaagggtgctcaggttaagacggtt
tcttttttgacttatttgttaaaaagttgtgccgaatatatcaggccgcatgaagaaagc
atatgtaagagcattgtaaatttgcttgtcacctgttcggattctgtatctatcagaaag
gaactattagtctcactaaagcatgttcttgggacggatttcaagagaggtttatttcct
cttattgacactcttttggaagagagggttctagttggaacagggcgagcatgctttgag
tctttgagacctctggcatacagcctactggcagagattgttcaccatgttcgagcagat
ttgtccctttctcagttatcacggatcatctacttattttcaaggaacatgcatgactcg
accctctctcttaacatccatacaacttgtgcacgactgatgttaaatctggtggaaccg
atatttgagaaaggtgttgaccagcattcaatggatgaagcacggattttgttgggacgt
atcctggatgcctttgttgggaaattcaataccttcaagcgtactattcctcagctttta
gaggagggtgacggaaaggatcaaatcactttgaggtcgaaacttgaacttcctgtccag
gcagttttgaatttgcaggttcctgccgaacattccaaagaagtgaatgattgtaagaat
ctgatcaagacactggtgatgggaatgaagacaatcatatggagtataacccatgcacat
ttgccccgacctcagggaatgcacccacaagctcttgcttcgcagtcatctgcttctcaa
gtttttaaaggaatgagagaagatgaggtgttgaaagcctctggtgttttaaaaagtggt
gtccattgcctagctctcttcaaagataaggatgaggaaaaggaaatgctaaatctattc
tcccaaattttggctattatggaacctcgagatctaatggatatgttctctgtatgtatg
gctgaactttttgagtgcatgattgacaatactcaactggttcaaatatttgccactctt
cttcaagctcccaaggtatacaagccatttgcagatgttctgattaatttcctagtaagc
agcaaacttgatgttctgaagaatccagattcagctgcaactaaattggttctgcatctg
ttccggtgcctctttggggctgtgtccaaagcaccatctgattttgaacgaatattgcaa
cctcaagtgcctattattatggaagtctgcatgaagaatgctactgaaattgaaaacact
cttggttatatgcaattgctccgaattgttttcagaggacttgctggatgtaaattcgag
ctgcttcttagagatttaatccccatgctactaccttgtcttaatatacttctgacaatg
ctcgagggtccagccggtgaagacatgagagatcttttgttggaactttctttgacactt
cctgcacgcttaagctccttattgccataccttccccgtcttatgaggcctcttgtatcc
tgtttaagaggaagtgatgaacttgtgagcttggggttacgcacccttgaattctgggtg
gatagtctgaatcctgattttttggagccaagtatggcaaatgtgatgtctgaagtgatc
ttagcattatggtctcacttgaagccggtgccatatccttggggtggtaaagcgttacag
attgtaggaaagttgggtggtcgcaatcgacgatttctgaaagagccacttacacttgaa
tgcaaagataatccagagcatgggcttcgcttagttctgacgtttgcgccgtccactcca
tttcttgtgccaatggacaaattcattaatcttgctgtagcagctgttattcagaaaaac
ctcactacagacatctactacaaaaagcaagctctaaaattcctccgcgtttgcttgttg
tctcaacttaatttgcctgggtgcgtcactgatgagggtcagatgaccaagcaattatca
gctttgttactttcctcttttgattcatcttggcgcaggagtgaatcaacagaaataaag
gctgacttaggggttaaaacaaagactcagttaatcgctgagaagtcgatcttcaagaca
ctattgataactataattgcttccagttctgatccggatctcagcgactcagatgatgac
tttgttataaacatatgtcgccattttgcaattattttgcatggggactgtacctcgtcg
tatgcttccactagtactgctccatttgggggttctgtgagttcaacaagttccaagccc
aatatcaattggtctactaacttaaaacatctggatcctttgatatttttagatgctctt
gttgatgtgcttgcagatgaaaacaggctccatgccaaagctgctctgactgcgttaaat
gtgtttgtagggaaagtgaatgtcgaaacattatgtcttttccaagtaaaaattgttcgt
ggtctggtttatgttcaaaagaggcttcctatttatgctagcaaagagcaagatgagaca
agtcaggttcttatgcagattctaagagtggttaataatgttgatggagaaaatagtgac
gcccgcagacaaagctttcaaggtgttgtagaatatcttgctactgaattgttcaatccc
aatgcatctatcacagtgaggaaaaatgttcagaactgtcttgcacttttggctagccgg
actggtagtgaggtatctgaactgcttgagcctttataccaacctttgttgcagccactt
attatgcgtccacttcgatcaaagacaattgatcaacaggttggaactgtgacagctctg
aatttttgtttagcattgaggccgccccttctaaaagtgactccagagttggttaacttc
ttgcaagaagcgttacaaatagctgaggctgatgaagctgtatgggctgtcaagttgatg
agtcctaaagttcttacatcgttgaacagacttcgaacagcttgtattgagattctgtgc
acaacgatggcatgggctgactttcgaactcaaagtcacaatgaactgcgtgcaaagata
atttccatgtttttcaagtccttaacgtgtcgagcaccagagattgtgaccgtggccaag
gatggtttaagacaggttattaatcaacaacggatgcccaaagaacttcttcagagtagc
ctcagacctatactagttaatctggcacatacaaagaatctcaatatgcctttactccaa
ggtctggcacgtcttcttgaacttctatcaaattggtttaatgtgacgttaggaggtaag
ttgttggagcaccttaaaaattggttagagccagagaaacttgcacaatcccagaaatca
tggaaagctggtgaagagccgaaaattgcagcagctattatcgagctcttccacttactt
ccacttgctgcgtcaaaatttctggatgaacttgtaacattaactatcgacttagaagca
gctcttccgccagggcaagtttacagtgagattaatagcccataccgtctcccgctgacc
aagttcttgaatcgatatgcaactctagctgttgattattttctttccagattaagtgaa
ccaaaatatttccgaaggtttatgtatgtaatccgctcagatgctggccaaccattaagg
gaagaacttgcaaaatctccacataagatactttcatataaattggaaagttctaacacg
ccattaacaaaatccaatgtagcatcagatgcatattttcagggtctctatcttatcaaa
actatggtgaaactgataccgagctggctgcagagtaaccgtactatttttgatgccttg
gctctcctttggaaatcacatgcaaggacatcccgtttacagaatgagcaagagttgact
ttagttcaggtgaaagagagcaaatggcttgtcaagtgcttcctcaattatctgcgacat
gaaaaatctgaaatgaatgttcttttcgatgttctctcaattttcttgttccatagtcgt
attgactacacctttttgagggagttttacattattgaggttgcagaagaatatccaccc
aaaacgaaaaaagcaattgtcttgcattttctaaaccttttccagtcaaaacaactcagc
catgatcatctggttcaggcaatgcaaatgctcattcttccaatgcttacccatgccttc
cgaaacggacaaacatgggaagttattgaccctagtatagtcaagaccattgttgagacg
ctccttgatccacctgaagaggtttctactgaatatgacgaacctttgaggatcgaactt
ttgcagttagctactttgcttctgaaatatcttcagagtgatctggttgatcatagaaaa
gagctcatcaagtttggatggaatcatctcaaacgggacgatagtgctagtaaacagtgg
gcatttgttaatgtttgtcacttcttggatgcttaccaagctccagagaaaatcattctc
caggtttttgttgcgcttcttaggacatgccagccggagaataagatgctagttaagcaa
gccctggatattttaatgccagctttaccgaaaaggcttcctcttggagattcaagaatg
ccgatttggataagatacaccaaaaaaattttggtggaggagggccactcaattccaaat
ttgatccacatcttccaactcattgtccggcactcagatctgttttacagttgtagagca
caatttgtacctcagatggtgaattccttaagtcgtcttggtttgccatacaatactaca
gcagaaaataggcggcttgcaattgaacttgctggattggttgtcagctgggaaagacaa
agacaaaatgaaactaaaatggttattgatgctgatgcaaccagtgaggtcagtaatggg
ttacatccttcatccagtgcggatcctaagcgctcaactgatggatcttccatatctgaa
gacccaagtaaacgagttaaaattgaacctggtctccaatcattgtgtgttatgtcacct
ggtggtgcatcgtcaatccccaatgtagaaactcctggatctgctacccagcctgatgag
gaattcaagccaaatgctgccatggaagaactaatcattaactttcttataagagtagca
gtggtaattgagcctaaggacagggaagccaacactatgtacaaacaagctttagatttt
ctttcaaaagctttggaagtttggccaaatgcgaacgtcaaatttaactatttagaaaag
ctgcttagtagcatgccaccgtctcagtcagatccgtccacagcacttgctcagggcttg
gatgtcatgaacaaggttctggagaagcagccgcatcttttcattaaaaacaacatcagc
cagatctcacagtttcttgagctgtctttcaaacacaagatgttcgacgctgggaaatcg
ctatgctctttgttgaagatggttttcatcgccttcccacatgatggagctagtacgcct
cctgacataaagctgttgtatcagaaattcagtgagctgatacaaaaacatgtgcatcct
gttactgctccacaagtgtcaggagatgataactctctcggttcaatcagctttgtactt
gttgtcctcaaaaccttggcagaggttcagaaaaactttgttgatccttatgtactggtg
catatccttcagcgtctttcgcgggatctgggatcagcagcgggtgctcatcctagacaa
agccagcggacagattcagattctgcagtaacttcttctcgtcaaactgctgatgttggg
gtagtcatatctaatataaagtcggtcttggaacttattgatgaaagggttatgctttta
gcggattgcaaaagacctgtgactcaaatattgaacacgttgctttcagaaaaggggact
gattctagtgtgcttatctgcgtgctagacatgttaaaaaggtgggctgaggatgatttc
gggaaaacaagtttatcggggtcctctggtgcatttcttacccagaaagatatagtttct
ttcctccagaagcttgcacaggttgataagcagcacttctcatctgttgctttggatgag
tgggataaggcgtatctccagcttttatatggactttgtgccgattcaacgaagtatccg
ttggcactccgacaagagatctctctgaaagttgagagacattccatgcttggtttacgg
gcaagggatcctgatatgcgaaggaagttcttcttgttataccatgagtctctcggaaaa
aatttatttgcacggttgcagtatattattcaaaaccaagattgggaagctatgggtgat
gttttttggctcaaacagggtcttgatctcctcctagccattttaattgaggagaagccc
attacgctagcaccgaattctgccagggtagtaccacttttgtcatcacaaaatcctgga
acacattaccaaccacctgctatgccagagggacctgaagaagttggctcaatgtttgat
agcattgtaatgaagcatgcacaatttcttagtgcggcaagcaaacttcaggtcgctgat
gttgttatccctttaagggagcttgctcacacagatgccaatgttgcttaccatttgtgg
gtgctagtatttccaattgtgtgggcaactctacacaaggaagagcagaaagctttagct
aagcctatgatttctctactttcgaaggactaccacaagaagcagcaagggcacagacca
aatgttgttcaagcacttctggaagggcttcagttgagccatcctcaacctaggatgcct
agtgagcttatcaaatatataggaaaaacgtacaatgcatggcatcttgcattgactttg
ttagagactcatgtcatgctgttcacgaatgaatcaagatgtgctgagtctcttgctgag
ctttatcgtttgttaaacgaagatgacaggagatttggattgtggaagaataggtccaac
accaccgaatcgagagctgggctttcaatggttcaacatggattttggcaacgtgctcag
agcctattttatcaggcaatggttaaggcaacccaaggcacttacaataacacagtacct
aaggccgaaatgtgcctgtgggaggagcaatggctccactgtgccactcaacttggtcag
tgggatgccctggtagattttggaaaaagcaccgagaattatgaaattttgcttgatagt
ctttggaaagctccagattgggcatacttgaaagatcatgtgatacccaaagcacaagtg
gaagagacgccgaagcttcgtttggttcaagcttgttttgcccttcatgaaaaaaatgca
aacggtgtaggagatgctgaaaacatagttgggaaaggcgttgatcttgctttggaacag
tggtggcagttaccggaaatgtctcttcatgctagggtgcctctactgcagcaattccaa
caactagtggaggtgcaagagtcttctagaatttatgttgacatcacaaatgggagtaaa
gttcctggaaatgctgctgttgggggacagggaaatcattatgcagatctgaaagacatt
cttgagacttggaggctaagagctccaaatgaatgggataatatgaccatctggtatgat
atgctgcagtggaggaatgagatgtataatgttgttattgatgcatttaaggattttata
acttcaaatactcaacttcatcaccttggttatcgtgacaaagcatggaacgtcaataag
cttgctaggatagctcggaaacaagggctttatgatgttagcgttcagatacttgaaaaa
atgtatgggcactcgcaaatggaagtacaggaagcctttgttaaaattaaagagcaggca
aaagctcatctggaaacgaaaggagagctcgctactggtcttaatctggttaatagcaca
aatttggagttctttctagcgaagaacaaggcagaaatttttcgactaaagggggatttt
catttgaagctaaacgacactgaaggtgctaatattgcatattccaacgcaatcacccta
ttcaaaaatttacccaaaggatggataagctggggaaattactgtgagatggcataccaa
gaaacacaagaggaaatctggctggaatatgccgttagctgctttcttcagggtataaga
tttggagtttccaattccagaagtcacatggctcgtgttctttaccttcttagtttcgat
acagcaaatgagcatgttggtagaacatttgataaacacttggaccaagtacctcactgg
gtgtggctttcttggatcccacagctgttgctttccttgcagcgtacagaagcaccccat
tgcaaattagttctaatgaaaattgctgcagtattcccgcaggctctctattactggctt
cgcacc
DBGET
integrated database retrieval system
