Camelina sativa (false flax): 104720731
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Entry
104720731 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104720731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104720731
Membrane trafficking [BR:
csat04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
104720731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
104720731
NCBI-ProteinID:
XP_019089541
LinkDB
All DBs
Position
12:10925..23052
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AA seq
1682 aa
AA seq
DB search
MSSSQNLGGATRCGRVIGPSLDKIIKNAAWRKHTFLVSACKSVLDKLETLSDSPDPSSPL
FGLSTSDSDAVLQPLLLSLDTGYAKVIEPALDCSFKLFSLSLLRGEVCSSSPDSLLYKLI
HAICKVCGIGEESIELAVLRVLLAAVRSPRILIRGDCLLHLVRTCYNVYLGGFNGTNQIC
AKSVLAQIMLIVFTRSEANSMDASLKTVNVNDLLAITDKNVNEGNSVHICQGFINDVITA
GEADPPPDFLLVLQGPEEEEDDGASTSKIREDGFLLFKNLCKLSMKFSSQENTDDQILVR
GKTLSLELLKVVIDNGGPIWRSDERFLNAIKQFLCLSLLKNSALSVMSIFQLQCAIFTTL
LRKYRSGLKSEVGIFFPMLVLRVLENVLQPSFLQKMTVLSLLENICHEPNLIVDIFVNFD
CDVESPNIFERIVNGLLKTALGPPPGSSTTLSPVQDITFRHESVKCLVSIIKAMGTWMDQ
QLSMSESLLPKSLENEAPVDNHSSPNEEDGTTTDHDFHPDLSSESSDAATLEQRRAYKIE
LQKGITLFNRKPSKGIEFLISCKKVGNSPDEVVSFLRNTTGLNATMIGDYLGEREEFPMK
VMHAYVDSFDFKEMNFGEAIRFFLKGFRLPGEAQKIDRIMEKFAERFCKCNPNSFSSADT
AYVLAYSVIMLNTDAHNIMVKEKMTKADFIRNNRGIDDGKDLPEEYLGALYDQVVINEIK
MSSDSSAPESRQSNGLNKLLGLDGILNLVYWTQTEEKAVGANGLLIKHIQEKFRSKSGKS
ESAYHVVTDVAILRFMVEVSWGPMLAAFSVTLDQSDDRLAAVECLRGFRYAVHITAVMGM
QTQRDAFVTSMAKFTNLHCAGDMKQKNVDAVKVSFFLXKSVVSFCICCPHIRFSRYKNRE
MKHFKLTADSRPXSSSETEEKKALGFPNLKKKGALQNPVMMAVVRGGTYDSSAIGPNIPG
LVKQDQINNFIANLNLLDQIGSFQLNNVYAHSQRLKTEAIVAFVKALCKVSMSELQSPTD
PRVFSLTKLVEIAHYNMNRIRLVWSRIWSILSDFFVSVGLSENLSVAIFVMDSLRQLSMK
FLEREELANYNFQNEFLRPFVIVMQKSSSAEIRELIVRCISQMVLSRVSNVKSGWKSVFK
VFTTAAADERKNIVLLAFETMEKIVREYFSYITETEATTFTDCVRCLITFTNSKFTSDVS
LNAIAFLRFCALKLAEGGLVWNEKGRSSSPGTPVTDDHAPNTQNFMDADENISYWVPLLT
GLSKLTADSRPAIRKSSLEVLFNILKDHGHIFSRTFWIGVFSSVIYPIFNSVWGENDLLS
KDEHSSFPSTFSPHPSGVSWDAETSAMAAQSLVDLFVSFFTVIRSQLSSVVSLLASFIRS
PAQGPTVAGVGALLRLADELGGSFSKDEWKEIFLAVKEAASLTLSSFMKTLRTMDDVPDE
ETLSDQDFSNEDDVDEDSLQTMSYVVARTKSHITVQLQVVQVVTDLYQNNQRSLLASHVT
VILEILSSISSHAHQLNSDLILQKKMRRACSILELSEPPMLHFENDTHQNYLDILQDLLT
YNPGVSLELNIESQLITVCVQLLKMYLKCTLFQGSELEETRQPKNWILPMGATSKEEAAA
RSPLVVAVLKALRELKRDSFKRYAPTFFPLLVELVRSEHSSSQVPQVLSTVFHTCMGPMM
GE
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgcagaaccttggtggcgccaccagatgcggccgtgtgattgggccatct
ttggacaagatcataaaaaatgccgcgtggcgcaagcacaccttcctcgtttccgcctgt
aagtctgtcctcgacaagttggagactctctccgattctcccgatccttcatcgcctctc
ttcggtctctccacctccgattcagatgccgtccttcagccactccttctctctcttgat
accggctacgccaaggttattgaacctgctctcgattgctctttcaagctcttctccctc
tccctcctccggggcgaggtctgctcatcttctcctgattcccttctctacaagctcatc
cacgcgatctgcaaggtttgcggcatcggcgaggagtcaattgagctggcggtccttcgc
gtcctcctcgccgccgtcagatctcctcgcatcctgatccgtggcgattgtttgctccat
ctagtcaggacttgctacaatgtgtatctcggcggatttaacgggaccaaccagatctgc
gctaaatctgtgttggctcagatcatgctcatcgtcttcaccagatccgaggcgaattct
atggatgcgtcactcaaaacagttaatgtcaacgacttgcttgccatcacggataagaat
gtcaacgaaggcaactctgttcatatttgtcagggtttcatcaacgacgttattacggcc
ggggaagcagatcctcctccggatttcctgctagtcttgcagggcccagaggaggaggag
gatgatggtgcttcaactagcaagatcagggaagacggattccttctctttaaaaatctg
tgtaagctgtctatgaagttctcgtcacaagagaacaccgacgatcagattcttgttaga
ggcaagactttgtctctcgagttgctcaaagtcgtcattgataacggtggcccgatctgg
cgttctgacgaaaggtttctcaatgccattaagcagttcctttgcttgtctttgttaaag
aatagcgcactctcggttatgtctatttttcaacttcaatgtgctatcttcaccaccttg
ctacggaaatatagatcgggtttgaaatcagaagtaggcatattcttccccatgcttgtc
ctccgtgttcttgaaaatgttcttcagccaagtttcctgcagaaaatgaccgtgctcagc
ttacttgagaacatttgccacgagccaaacctaatagttgacatatttgtcaactttgac
tgtgatgtggagtcaccaaacatcttcgaaaggattgtcaacggtcttctaaaaactgct
ttagggcctcctcctggttcgtcgacaactttgtccccagtccaggatattacttttcgg
catgaatcagtgaagtgcttggttagcattattaaggcaatgggaacatggatggaccaa
caattgagcatgagcgaatcacttctgcctaagagcttagaaaatgaagcacctgtagac
aatcattctagcccaaatgaagaagacgggacaactacagatcatgactttcacccagat
ttgagttcagagtcatcagacgctgcaactcttgaacaaaggagggcatacaaaattgaa
ctccagaaaggcatcactctattcaatagaaagccgtcaaagggtattgagtttcttata
agctgtaaaaaggttggcaactccccagatgaggtggtgtcgttcctgagaaataccaca
ggcttgaatgctaccatgattggtgattatttgggtgaaagagaggagtttccaatgaaa
gttatgcatgcctatgtggactcgtttgatttcaaggagatgaattttggtgaggcaatt
aggtttttcttaaaggggttcaggcttcctggggaagcgcagaaaattgaccgcataatg
gaaaagtttgctgaacgcttttgcaaatgcaatccaaattcattcagcagtgctgacaca
gcatatgttcttgcatactctgtgataatgcttaacactgatgcccacaatatcatggtt
aaagagaagatgaccaaggctgattttatcagaaataaccgaggcattgatgatggcaaa
gatctaccagaggagtatcttggtgcgctttatgaccaagttgtcataaatgaaataaag
atgagttctgattcttctgccccagaaagcaggcagtccaatggcttgaataaactactg
ggtctggacggtatactcaatctggtttattggacacagacagaagaaaaggcagtcggg
gctaatggtcttcttataaagcatattcaagaaaagttcaggtcgaagtctggaaaatca
gaatcagcttaccatgtcgttacagacgttgcaatattgcgttttatggttgaagtttca
tggggaccaatgcttgccgcattcagcgtgacacttgatcagagtgatgacaggcttgct
gcagttgaatgcttacgaggctttcggtacgccgttcatattacagcagttatgggtatg
caaacgcaaagagatgcatttgtcacttccatggccaagttcacaaatctccattgtgca
ggagatatgaagcaaaagaatgtcgatgctgttaaagtaagtttcttcttatgaaaatca
gttgtttctttctgtatttgctgtcctcacatccggttttcaaggtataagaacagagag
atgaagcattttaagctaactgctgattccagaccagnctcttcatccgagacggaagag
aagaaagccttggggtttcctaacttgaagaaaaaaggagccctccagaatccggtgatg
atggctgttgttcgagggggcacatatgatagcagtgcaattggaccaaatattccaggg
cttgtgaagcaggaccagatcaataacttcattgcaaacttgaatttgcttgaccagatc
gggagttttcagttgaataatgtatatgctcatagccagcggttgaagactgaagccata
gtagcatttgttaaagctctatgcaaagtctctatgtcagaactacagtctcctacggat
cctcgagtatttagcctcacaaaattagttgagatcgcccactacaacatgaaccgcatc
aggctagtctggtctcgcatatggagcatcctgtcagatttttttgtatctgttggcttg
tcggagaatctttctgttgcaatattcgttatggattcactacgacaactttctatgaag
ttcttggaacgtgaggagctggctaactacaacttccagaatgaatttcttcgaccattt
gtcattgttatgcaaaaaagcagttctgctgaaataagagaactaatagttcggtgcatt
tctcaaatggtactcagccgtgtcagtaatgtaaaatcagggtggaaaagtgttttcaag
gttttcacaaccgcagcagctgatgaaaggaagaacattgtgttgctggcctttgagaca
atggaaaaaattgtccgagagtatttttcatatatcacagagacggaggcaacaaccttt
actgattgtgttagatgcctcataactttcacaaacagcaaattcaccagcgatgttagc
ctgaatgctattgcatttctacgattttgtgccctaaaacttgcagaaggaggccttgtg
tggaatgagaagggtaggtccagcagtcccggtactccagtaactgatgaccatgcacca
aatacccaaaattttatggatgcagatgaaaacatatcatattgggttcctttactcaca
ggattgtctaagctaactgctgattccagaccagcaatccgtaaaagctccctggaagtg
ctctttaatattttaaaggatcatggtcatattttctcacgaacattctggattggtgtt
ttcagttctgttatttatcctatatttaatagcgtgtggggcgagaatgatctgctttct
aaagacgaacacagttcattcccctctacattttctccacatcctagtggagtttcttgg
gatgctgagacttcagctatggcggcacagtctctggtagacctatttgtcagctttttt
actgtcataaggtctcaactatcaagtgtagtgtccttacttgctagttttataagaagt
ccagctcagggtcctacagtagctggagttggcgcgttgctgcggttggcagacgaattg
ggtggcagtttctcgaaagatgagtggaaggagatttttttggctgtgaaagaagctgct
tcattgacattgtctagtttcatgaaaacactgagaaccatggatgatgttccagatgag
gaaacgttgtctgatcaggactttagtaacgaagatgacgtggacgaggacagcctgcaa
actatgtcttatgttgttgcaagaacaaagagtcacatcaccgtccagttgcaggttgtt
caggtagtgactgatctctaccaaaataatcagcggtcattattggcatctcacgtcact
gttatcctggagatactttcatcaatctcatcacatgcccaccagctaaattctgatttg
atactgcaaaagaaaatgaggagagcatgctctatcttggagctctctgaacctcccatg
cttcatttcgaaaatgacactcaccagaactacctggacattcttcaagacctactgaca
tacaacccaggagtgtccttggagctaaacatagagtctcaactgattacagtgtgtgtg
caattactgaagatgtacctaaagtgcactttgtttcagggttcagagttggaagaaacc
aggcagcctaaaaactggattctacccatgggagcaacatcgaaggaagaagcagcagca
agatctccactagtggttgcagtgctgaaggcactgagggaactgaaaagagattcattc
aagaggtatgcaccaactttcttcccattgttggtggagcttgtgcggagtgagcacagc
tcttcacaagtcccacaagtcttaagcaccgtgttccatacatgtatgggtccaatgatg
ggtgaatag
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