Camelina sativa (false flax): 104721045
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Entry
104721045 CDS
T05044
Name
(RefSeq) transcription factor SPATULA-like isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104721045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104721045
Transcription factors [BR:
csat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104721045
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Ribosomal_S20p
bHLH_LHW
CENPU
Motif
Other DBs
NCBI-GeneID:
104721045
NCBI-ProteinID:
XP_010437251
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Position
11:1686821..1688897
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AA seq
358 aa
AA seq
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MGDKKLISSSSSSSSIYDTRNHHHQPPPSSSSDEISLFLRHIFDRSSPNLPSYYSPATTA
TTMIGVHGDPHADNSRCFVSDAAAAALMSSKRVGDFSEVLVGGSSAVGSASTAACFGFNN
SNAQGNSSGTTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGGPPSRSSSKRC
RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMR
NGINLHPLCLPGTTLHPLQLSQIRPPEATNDPMLNHTNQFASTSNAPEMINTVASSYALE
PSIRSHFGPFPLLTPPVEMNREGGLTHQRLNIGHSNTNLTGEQAVFDGQQPDLKDRLT
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggagataagaaattgatttcgtcttcttcttcttcttcctcgatttacgatactcgt
aatcatcatcatcaacctccaccgtcttcttcttccgacgaaatctctctgtttctccgg
catattttcgaccgttcttctcctaatttaccttcttactattctccggcgacgacggct
acgacgatgatcggtgttcacggtgacccgcatgcagataactcgagatgtttcgtttct
gatgctgctgctgctgcgctcatgtcgtcgaagcgcgttggtgatttctctgaggtttta
gtcggtggaagctcagccgttggatcagcttctaccgccgcgtgtttcggtttcaataac
agcaacgctcaaggaaacagctctgggactactagagtatcgtcttcttctgttggagct
agtgggaatgagacagatgagtatgactgcgaaagcgaggaaggaggagaagctgtggtt
gatgaagctccttcttccaagtcaggaggtcctccttcgcgtagttcatctaagagatgc
agagctgctgaagttcataatctttctgagaagaggaggagaagtagaatcaatgaaaaa
atgaaagctttacagagtctcatcccaaattcaaataagacggataaggcttcaatgctt
gatgaagctatagagtatctgaaacagcttcagctccaagttcagatgttgacaatgaga
aatggaataaacttgcatcctttgtgcttacctggaactacattacacccattgcaactc
tctcagattcgacccccagaagcgaccaatgatcctatgcttaatcacaccaatcagttt
gcttcgacttctaatgcaccggaaatgatcaataccgtggcttcttcatacgctttggaa
ccttccattcgcagtcactttggacctttccctctccttactccacctgtggagatgaat
cgagaaggcgggttaactcatcaaaggttgaacattggtcattccaacacaaacttaacg
ggggaacaagctgtgtttgacggacaacaacctgacctaaaagatcgacttacctga
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