KEGG   Camelina sativa (false flax): 104721106
Entry
104721106         CDS       T05044                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104721106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104721106
Spliceosome [BR:csat03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104721106
 Complex B
    104721106
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded PRP38_assoc
Other DBs
NCBI-GeneID: 104721106
NCBI-ProteinID: XP_010437317
LinkDB
Position
11:1998637..2002459
AA seq 571 aa
MTDFEDHEGNGTVADALYAEDNGARGGEIEDKLDSKPKRETRDNERETSRSRDREREKGR
DKDRERDSEVSGRSRDRDGEKGKERSRDRDRDRERHHRSSRHREHSRERTERRERGSRDD
DDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRSRSRSPSKSKRVSGFDMAPPASA
MLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQPFGGLPMMPIQAMTQQATRHARRVY
VGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNA
MSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSSNLNLAAVGLTPGASGGLEGPDRIF
VGGLPYYFTESQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNG
IKMGDKTLTVRRANQGTMQPKPEQENVLLHAQQQIAFQRIMMQPGVMATTVVCLTQVVTE
DELRDDEEYEDIMEDMRQEGGKFGALTNVVIPRPSPSGEPVPGLGKVFLKYLDTDGSSKA
RIGMNGRKFGGNEVVAVFYPEDKFEQGDYGA
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgacggacttcgaagatcacgagggaaacggtacggttgctgacgccctttacgccgaa
gataacggagctcgcggcggcgaaatcgaggataaattagactcgaaacctaagagagaa
acgcgtgacaatgaaagagagacttcaagaagtagagatagagaaagagagaagggacgt
gataaggacagagaaagggattctgaagtctctggtagaagtagggacagagatggagag
aaaggcaaggagagaagtagagacagggacagagatcgtgagcgtcatcacagaagtagt
cgtcacagggaacatagcagggagcgtactgaaagaagggaacgtggtagtagggatgat
gatgactaccgccgaagccgtgatcgtgaccatgataggcgtagagatgatcgaggaggt
agacgcagccgtcgatctcggtctcgttcaaaagataggtctgagcgcagatcaaggtca
cgatctccatccaaaagtaagcgagtcagtggatttgatatggcacctccagcctctgca
atgttagctgctggtgctgctgttacaggccaagttcctcccgcaccacctactcttcct
ggggctgggatgttccccaatatgtttcccttgccgactggacagccatttgggggtctc
cctatgatgccaattcaggctatgacacagcaggcaactaggcatgctcgcagagtctat
gtcggtgggctttcccctacggcaaatgaacagtctgtggctactttttttagtcaagtt
atggctgctgttggtggaaacactgctggtccaggtgatgcagttgttaatgtatatata
aaccacgagaagaagtttgcttttgtggagatgcgatctgtcgaagaagcaagtaacgct
atgtctttggatgggattatatttgagggagctccagtgaaggtgaggagacctagtgac
tataacccatctctagctgcaactcttggtccaagccagcccagttccaatctaaactta
gctgctgttggtctgactccaggtgcttctggtgggcttgagggaccagatcgtattttt
gttggtggacttccatattacttcaccgaatcacaagtcagggagttgttggagtccttt
ggagccctaaagggatttgatcttgtaaaagatcgagaaacaggaaactctaaaggatac
gccttttgtgtataccaagatctttctgttacagatattgcgtgcgctgccctaaatggt
atcaagatgggagataagacacttacagtgagacgtgccaaccagggaacaatgcaacca
aagcctgaacaagagaatgtattactgcatgcacagcagcaaattgcttttcagaggatt
atgatgcagccgggtgtaatggcaacgactgtggtatgtctgactcaggttgttaccgag
gatgagcttagagatgacgaggagtatgaagatataatggaagacatgagacaagaaggc
ggaaagttcggtgctttgaccaatgttgtgattccgcgtccaagccccagtggtgagcca
gtgccaggccttggcaaggtgtttttgaagtatctcgatacagatggctcgtccaaggca
agaatcgggatgaatggtaggaaatttggaggaaacgaagtcgttgcagtgttttacccc
gaagacaagtttgaacagggtgattatggtgcctga

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