Camelina sativa (false flax): 104721108
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Entry
104721108 CDS
T05044
Name
(RefSeq) plant-specific TFIIB-related protein 1 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104721108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104721108
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
104721108
Prokaryotic type
Archaeal type
TFB
104721108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
104721108
NCBI-ProteinID:
XP_010437322
UniProt:
A0ABM0U810
LinkDB
All DBs
Position
11:2010716..2013457
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AA seq
508 aa
AA seq
DB search
MKCPYCSSAQGRCATTSSGKSITECSSCGRVVEERQTQNHHLFHLRAQDTPLCLVTSDLQ
KAAQPSPEDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLELASSTSN
STNSNSSTVVVDNLRAYMQIIDVASILGLDSDISEHAFQLFRDCCSATCLRNRSVEALAT
ACLVQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFC
TLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITG
LTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAADQPEPSFTD
RDKPSVKPIEAFDHTYQQPKGKEDKQPKFRQPWLFGTASVMNPAEMISEAGKPNAMDYDK
QQSDKQQLSDKDTLPIYLRQHNHFPSNPSPSTGISTINWSFRPSSVPGTSMNLPVVHPPK
LPPGYAEIRGNGSQTGNKNVSNPHGDFC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccctactgttcatcggcgcaaggacggtgtgccaccacaagttccggtaaa
tcgataacggagtgctcatcatgcggtcgcgtagtagaagaacggcagacgcaaaaccac
catctctttcatctccgagcccaagacactcctctctgcctagtcacttccgacctccaa
aaggcggcgcaaccgtctcctgaagacgaggaagatccgtttgagccaaccggattcatc
accgccttctctacctggtccctcgagccgagcccgatcttcgctcgctcttccctctct
ttctccggtcatctcgctgaactcgaacgaaccctagaactcgcttcgtccacatcgaat
tccacgaattcgaattcttcgacggttgtggtggataatcttagggcttatatgcagatt
atcgatgtggcgtcgattttagggttggattctgatatctctgaacatgcttttcaactg
tttagggattgctgctcagctacttgtttgcggaacagaagcgttgaagctttggctact
gcttgccttgttcaagctattagggaagcccaggagcctagaactcttcaggaaatctcc
attgcagccaatgtgcagcagaaggaaattgggaagtacatcaagattttgggagaagct
ctacaactaagtcaacccatcaatagcaactctatatcagttcatatgccaagattctgt
accctccttcaactaaataaatctgctcaggaactagcaacacatattggagaagttgtg
atcaacaaatgcttctgcacccgtagaaacccgatcagcatttctgcagctgcaatctat
ttggcatgtcagcttgaagacaaacgaaagacacaagcagagatttgtaaaataaccgga
ctaactgaggtaaccctacgtaaagtctacaaggaactgctagaaaattgggacgacctg
ctcccatctaactacacaccagccgtcccaccagagaaagcatttcccacaaccacaata
tccacaacccgctcaacaactcctagagccgcggatcaacctgaaccaagttttacggac
agagacaagccatctgtcaaaccaatcgaagcttttgatcatacctaccaacaacccaaa
ggcaaagaagataagcagccaaaattcagacagccttggctgtttggaactgccagtgtc
atgaacccagcggagatgataagcgaagcaggaaaacctaatgctatggactatgataag
caacaatctgataagcagcagctaagtgataaggacacattgcctatatatctaagacaa
cataaccatttcccttcaaatccatctccatcaacaggtatcagcacaatcaattggtca
tttcgaccttctagtgtccctggaacttccatgaacttgcctgttgtccatccgccaaaa
ctgcccccgggttatgctgagattagaggtaatggatcgcaaacaggaaacaagaatgtt
agtaatcctcatggagacttctgctag
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