Camelina sativa (false flax): 104721195
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Entry
104721195 CDS
T05044
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
KO
K12897
transformer-2 protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104721195
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104721195
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104721195
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104721195
Spliceosome [BR:
csat03041
]
Common components
Common spliceosomal components
SR proteins
104721195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
104721195
NCBI-ProteinID:
XP_010437422
LinkDB
All DBs
Position
11:2446709..2449044
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AA seq
235 aa
AA seq
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MADSPRRRDSRDSRSPSPRKGRARSRSRSRSRSRLRSRSRSRSLPRPISPLRSRGRSRSR
SRGRSEVENPGTTLYVTGLSTRVTDKDLESHFSKEGKVASCFLVMEPRTRVSRGFAFVTM
DSLKDAERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDSDREGHSSRGR
HYDRDDYRDRRTPRRDYSPRDERSRRDRSYSPYGRSPERRPERRSEKRYESRGSR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctcgaagaagggatagtagggattcacgatctccttcaccccggaaa
ggacgagccagatccaggtcaagatctagatccaggtccaggcttaggtccaggtctagg
tcaagatctttgcctagacccatatctccgttaagaagccgtggaaggtcaaggtcaaga
agccgtggaagaagtgaagttgaaaaccctggtacaactctctatgtgactggtctatct
acacgagtcactgacaaggatcttgaatcacatttctccaaggaagggaaggttgcgtct
tgttttcttgtgatggagccgcgtacccgtgtgtctcgtggttttgcctttgttacaatg
gatagccttaaagatgctgagcgctgcatcaaatatctcaaccagtctgtactagaaggc
cgatacattactgtcgaaaggtcccggagaaagcgcccgagaactcccaccccaggccac
tatcttggcttgaaaagctccagagacagcgaccgagaaggccatagcagtcgagggagg
cactatgaccgtgatgattatagagaccgtaggacaccaagacgcgactattcaccccgt
gatgaaaggtctagaagagaccggtcttactctccttatggaagaagcccagagagaagg
ccagaaagaaggtcagagaaaaggtatgaatcccgtggctcgagataa
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