Camelina sativa (false flax): 104721283
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Entry
104721283 CDS
T05044
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104721283
03083 Polycomb repressive complex
104721283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104721283
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104721283
Histone modification proteins
HAT complexes
HATB complex
104721283
HDAC complexes
Sin3A-HDAC complex
104721283
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104721283
PRC2.2
104721283
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104721283
Heterochromatin formation proteins
Other heterochromatin formation proteins
104721283
Chromatin remodeling factors
NuRD complex
104721283
NuRF complex
104721283
NuRF complex (fruit fly)
104721283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR75_1st
ANAPC4_WD40
MIOS_WD40
eIF2A
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Ciart
Motif
Other DBs
NCBI-GeneID:
104721283
NCBI-ProteinID:
XP_010437533
LinkDB
All DBs
Position
11:2869995..2872892
Genome browser
AA seq
422 aa
AA seq
DB search
MAAEEGKEEPGLDQVEEEFSVWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYAKDPS
FSVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGSLRLETDPFQVEIKQKIRVDGEV
NRARCMPQKPTLVGAKTSGSEVFLFDYARLSAKPQTSECDPDLRLMGHEDEGYGLAWSSF
KEGYLLSGSQDRRICLWDVSATADDKVLNPMHVYEGHQSIIEDVAWHMKNDNIFGSAGGD
CQLVIWDLRTNQMQHQVKVHEREINYLAFNPFNEWVLATASSDSTVALFDLRKLTAPLHV
LSRHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH
GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDEGNQNAQHSNEN
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaagagggtaaagaagaaccgggattggatcaggtagaagaagagttctct
gtttggaaaaggaacacaccatttctctacgatcttatgatctctcatccgctcgaatgg
ccatctctaactcttcattgggtcccttctactccgattccgtatgcgaaagatccttcc
ttttccgtccataagcttatcctcggcacccatacctccggtggtgcccaggatttttta
atggttgctgacgtcgttatcccgacacctgacgctgaaccaggattaggatcattacga
ttagagactgatccttttcaggtggagattaagcagaagatacgtgttgatggagaagtg
aacagagctcggtgtatgccacaaaagccaactcttgtgggtgctaaaacgagtgggtct
gaggtgtttctctttgattacgccagactctctgcaaagccccaaactagtgagtgtgat
cctgatctcaggctaatgggacatgaagatgaaggttatggattggcttggagctccttc
aaggaaggttatcttttgagtggctcacaagatcggagaatctgcctctgggatgtttca
gctactgccgatgataaggttttgaacccaatgcatgtgtatgagggacatcaaagcatc
atcgaagatgtagcatggcacatgaagaatgacaacatatttggttctgcgggtggtgat
tgtcaactggtgatatgggacttacggacaaaccaaatgcaacaccaagtcaaagttcac
gagagagagataaactatcttgctttcaatccctttaatgaatgggtattagccacagcc
tcctccgattcgactgtcgccttgtttgaccttcgcaagcttactgcaccattacatgtt
ctgagcagacacgagggagaagttttccaagtggagtgggatcccaaccatgaaacagtg
cttgcatcttctggcgaggaccgaagactcatggtctgggatattaacagggtcggggat
gagcagcttgaaatagagttggatgcagaagatggtccacctgagctgctcttctctcat
ggaggccacaaggccaagatatcagactttgcctggaacaaagacgagccttgggtcatc
tcaagtgtagctgaagacaacagtcttcaagtctggcaaatggcggaaagcatctaccgt
gaagatgatgaggatgaggatgatgaaggcaaccaaaatgcacaacattccaatgaaaac
cagaaatga
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