Camelina sativa (false flax): 104721296
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Entry
104721296 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104721296
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104721296
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Helicases
104721296
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF3886
Motif
Other DBs
NCBI-GeneID:
104721296
NCBI-ProteinID:
XP_010437550
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All DBs
Position
11:complement(2930806..2937370)
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AA seq
635 aa
AA seq
DB search
MSKTKVKPVEDVNPEVMDEVEEAEEVEEQRNVGEEEEEEEEEKVEEDVDKSFEELGLDSR
LIRALTKKGIEKPTLIQQSAVPYILEGKDIVARAKTGSGKTLAYLLPLLQKLFSADSGSK
KKLAPSAFILVPSRELCQQVYSEVSSLIELCRVQLKAVQLTSSMTASDMRNALAGLPEIL
VSTPACIPKCFAAGVLEPTAVSESLEILVLDEADLLLSYGYEDNLRSVTSIIPRRCQCLL
MSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEPVPSNVQQFWVSCSAQDKLLHILALLK
LEVVQKKVLIFINTIDMGFKLKLFLEKFGIKSAILNGELPQNSRLHILEQFNAGLFDYLI
ATDDNSQTKKEKEEPKGEDNEENNKSKKRRKPKLDAEFSVVRGIDFKKVHTVINFDMPQS
VTGYIHRIGRTGRAYSSGSSVSLVSPDEMEGFEDIKSFLANDKNKDSDIITPFPLLTENA
VECLRYRAEDVAKSVTKISVRESRAQDLRNEIINSEKLKAHFEANPRDLDLLRHDKPLSK
TAPAPHLKDIPEYLVDLKTQEASKAVKLAGAAMGNSRRSGGGAGRNNKNKKRSRKGGDPL
KTFNPNGSKRGHGGGVGQKKDSSDGSTKQKKQKTV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagacgaaggtgaaacctgtggaggatgtgaacccggaagtgatggacgaggtt
gaggaagcagaagaagtagaagaacagagaaacgtcggagaagaagaagaagaagaagaa
gaagaaaaagtagaagaagatgtagataagagtttcgaagagctagggcttgattctcgt
ctaattcgtgccctaactaaaaagggtatagagaaacccactcttattcagcaatcagcc
gttccttacattctggaaggaaaagatatagttgctagggcaaagacgggttcaggtaag
actttggcttaccttttgccattgcttcagaagctattctcagcagattccgggagtaag
aagaagcttgctccttctgcgtttattcttgttccatctcgagagttatgccagcaggtc
tactcagaggtttcttcgcttatcgagttgtgtagggttcagttgaaagcagtgcagttg
actagtagcatgaccgcatctgatatgcgtaatgcattggctggactgcctgagattctt
gtctccacacctgcttgtattcctaaatgttttgctgctggagttttagagcccactgct
gtcagtgaatcacttgaaattctggttcttgatgaggcagatcttttgttgtcatatgga
tatgaagataatctaaggtcggtaacttcaataatcccaaggcgttgccaatgccttctt
atgtcagctactacaagttctgatgtcgaaaagttgaagaaattgattctgcacaaccca
atcgttttgacattgacagaagataatgacaaggaggagcccgtaccgagtaatgttcag
cagttttgggtttcttgcagtgctcaggataaactgcttcacattcttgctctcttgaag
ctagaggtcgttcagaaaaaagttctgatattcattaatacgattgacatgggtttcaag
ttgaaattattcttggaaaagtttggaatcaagtctgcaattttaaatggggagttgcct
cagaattctcggctccatatacttgagcaattcaatgcaggtctttttgattacttgatt
gcgacggatgataacagccagactaaaaaagaaaaggaagagcctaaaggtgaggataac
gaggagaacaataaaagcaagaagcgtcgcaaaccaaagctggatgctgagttcagtgta
gttaggggaattgatttcaaaaaagttcacacggtcataaactttgatatgcctcaaagt
gttactggatacattcatagaattgggcgtacagggagagcatatagcagcggttcttct
gtttctcttgtttctcctgatgagatggaagggtttgaagatataaagtccttcttagca
aacgacaagaacaaagatagtgatattatcacaccctttcctttgttgaccgaaaatgct
gttgagtgtcttagatatagagctgaggatgtggcaaagagtgttacaaagatttcggtt
cgagagtctcgagctcaggatttgaggaatgagataatcaactccgaaaagttaaaagct
cattttgaagctaatccaagagacttagatctgttgagacatgacaagcctttgagtaag
actgcacctgcaccacatttaaaggacatcccggagtatctagtggacctaaagacacaa
gaggcaagcaaggcggtgaagctagctggagctgcaatgggtaacagtaggagatctggt
ggaggtgctggtcgcaacaacaaaaacaagaaacgttccagaaaaggcggcgacccactc
aaaaccttcaaccccaatggatctaagagaggacacggtggcggcgttggccagaagaag
gattctagcgatggctcgaccaaacaaaagaaacagaagacagtttaa
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