Camelina sativa (false flax): 104721325
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Entry
104721325 CDS
T05044
Name
(RefSeq) inactive squalene synthase 2 isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00100
Steroid biosynthesis
csat00909
Sesquiterpenoid and triterpenoid biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104721325
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104721325
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csat01006
]
104721325
Enzymes [BR:
csat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104721325
Prenyltransferases [BR:
csat01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104721325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
CUX1_N
Motif
Other DBs
NCBI-GeneID:
104721325
NCBI-ProteinID:
XP_010437577
UniProt:
A0ABM0U8N8
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Position
11:complement(3045672..3048571)
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AA seq
410 aa
AA seq
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MGSLSTILRHPDELYPLLKLKIAINKAQKKIPLEPNLAFCYSMLHKVSKSFSLVIQQLGT
ELRNAVCVFYLILRALDTVEDDTSVAMEIKLPILIAFHRHIYDGDWHFSCGTKEYKVLME
QFHHVSAAFLELEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYAAGLVGLGL
SKIFITSELEMLTPDWKHISNSTGLFLQKTNIIKDYLEDINEIPKSRMFWPREIWGKYVD
KLEDFKKEENSTKAVQCLNEMVTNALIHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLA
LCYNNVQVFGGVVRLRRGLIAKIIDRTKTMDDVYGVFYDFSCMLQSKVDKNDPNAMKTLN
RLETIKKVCRENGVLHKRKTYVKDDAQSKIVMFVLLLAIVVMYLKANQCK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcttgagtacgattttgagacacccggatgagttatatccgcttttgaagttg
aaaattgctataaacaaagctcagaagaagatcccacttgagccaaacttagctttctgt
tattcaatgctccacaaagtttctaaaagcttctctcttgttattcaacaacttggcact
gagcttcgtaacgcagtgtgtgtgttttacttgattctccgagctcttgataccgttgag
gatgacacaagcgtagcaatggagatcaaacttccaattctgatagctttccaccgtcat
atatacgatggtgactggcatttttcatgtggtacgaaagagtacaaggttctaatggag
cagtttcaccatgtttctgcagcttttctggaacttgaaaaagggtatcaagaggctatt
gaagatataactaaaagaatgggtgcaggaatggccaagttcatttgtaaagaggtagaa
acaattgatgactatgatgaatactgccattatgctgctggacttgtgggtttaggtttg
tcaaaaatcttcatcacttcagaattagaaatgctgactccagattggaagcacatttca
aattctacaggtttatttctccagaaaacaaacattatcaaagattatcttgaagacatt
aatgagataccaaaatcgcgcatgttttggcctcgtgagatctggggaaaatatgttgac
aagcttgaggactttaagaaagaggagaattcaacaaaagcagtgcagtgtctgaatgaa
atggtcacaaatgcattgattcacgttgaagattgtttgaaatccttggcttcattgcgt
gatcctgcaatatttcagtcttgtgccatccctcagatcgtggctattggaacactagca
ttatgctataacaatgtacaagtctttggaggtgtagtgagattgaggcgagggctaata
gctaaaattatcgatcgcacaaagacaatggatgatgtctatggtgtgttctatgatttt
tcttgcatgctacaatcaaaggttgacaagaacgatccaaatgcgatgaaaacattaaac
cgactcgaaacaattaagaaagtttgcagagaaaatggagtccttcacaaaagaaaaact
tatgttaaagatgatgcacaatcgaagattgtaatgtttgtgcttctattggccatagtc
gttatgtatctcaaagcaaatcaatgtaagtag
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