Camelina sativa (false flax): 104721529
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Entry
104721529 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104721529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104721529
03036 Chromosome and associated proteins [BR:
csat03036
]
104721529
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104721529
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104721529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
104721529
NCBI-ProteinID:
XP_010437833
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All DBs
Position
11:complement(4071793..4075919)
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AA seq
715 aa
AA seq
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MPGMTSESGGGELVPFSTKEKAPVLYPLSYGLKSPVHRLSISWGCGNNLRVTVLTNPELR
DDDGEAGGKVVNVSLNGEDGEISDAQRRRIAYGSVSPFALLQSRRNSISSLSRMDMSPTL
YQTAWWEYVMEYSKDIKSLLSNTISSPAPLIEDPRSVIKDAEEPTSIKAAWELMELLYAD
KTCLSWLPERLVDWLSDYDILLSSSHPTVYSKLQDFQKELVGLQTIEDDPRYWDVMASAL
SVGWLEIVVKLLHLHGSYQLDQLGNRETENGLVEAVAVLVSKMPRMRPNLEDGKFGECFA
AKPDFMKTRERWQSQITKLECSAFWVQCAHHQTREGLRNMLRIMIGNADCLTAATCNWVE
LFVSHLLYLRPFTKGLDGMHNLAVKCIQSKPVNTSHKLLRLLIGILGENTEVVLAECSKE
FGSWMVAHAMELLTAGSDEGEVLVHEEQRKLGGINMEELHRLVYAQVLSSHALTWQIAPI
YLASCEKQGLALLELLFYRQPVQENQLLIKSLEICRLYELNNVSSKLMKISGVHHWKHGR
KGSGIFWLQQAQDEHCLSVIAQQLFDSVGKSLSDESLKQWEGLIELLGSESKISGGLDFL
HKYRDFKRSLKLVHDGKSIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKLLNWPERS
LLNVTQTNLMLNKLQEISIARLRPGFIETDLSAQAVGSVRVALATNLGRAFLEEC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtatgacttcagaatccggcggcggagaattggttccgttttcgacgaaggaa
aaagctccggtgctgtatcctttaagctacggcctcaagtctccggttcataggctttcc
atctcctggggctgcggaaacaacctacgcgtcacggttttaacgaatccggagttacgc
gatgatgacggagaagctggtggtaaggtcgtaaacgtgagtcttaacggcgaggatggc
gaaatcagtgacgcacagcggcgaaggatcgcttatggatcggtttcaccgttcgcgctt
ttgcagagcaggagaaactcaatttcgagtttgtctaggatggatatgagtcctactctg
taccagactgcgtggtgggaatacgtaatggaatacagcaaagatataaaatctctcctt
agtaatacaatatcttcccctgctcctctgattgaagacccaagatcagttataaaggat
gctgaggaaccaacttctataaaggctgcgtgggagttgatggagttattatatgcagat
aagacatgtctgtcttggttgccagaacggctcgttgattggctatctgactacgatata
ctcctttcaagctcacatccaacagtctattcgaaactccaggattttcagaaggaactt
gttggcttacagaccatcgaggatgatccaagatactgggatgtgatggcatctgcgcta
tcagttggttggctagaaatagtggtgaagttgttacacttacatggttcttatcaacta
gaccagctgggaaatcgtgagacagaaaatggtctggtagaagccgttgctgtcctcgtt
tcaaaaatgccacgaatgcgtccaaacctagaagatgggaagtttggtgaatgctttgca
gcaaagcctgactttatgaagacacgagaaagatggcagtcccagataactaaactagag
tgcagtgccttctgggttcaatgtgctcaccatcagacccgtgagggcttgagaaatatg
ttgaggatcatgataggaaatgctgattgcctcacagctgcgacatgtaattgggtggag
ctttttgtttcacatcttctatatctcaggccattcacaaagggattagatggcatgcat
aacctagccgtaaaatgtattcagtcaaagccagttaacacttcccataagcttctaaga
ctgcttattggaattctcggagaaaatactgaggttgttctggcagagtgttccaaagag
tttggctcctggatggttgcacatgccatggaattattgacagctggaagcgatgaaggt
gaagttcttgtacatgaggagcagcgaaagttgggtggaatcaatatggaagagctccat
agactcgtttatgctcaagttctttcttctcatgctttgacttggcagatagctcctatt
tatctagcatcgtgcgagaaacagggattagctttattagagttgttattctacaggcag
cctgttcaagaaaatcagttgcttattaagagcctagaaatttgccgtctatatgaactc
aataatgtcagctctaaacttatgaagatttctggagtgcatcactggaaacatgggagg
aaagggtctggtatattttggctccaacaagcccaggacgaacattgtctcagcgtgatt
gctcaacagctgtttgattctgttggaaagtcattgtctgatgaaagtctcaagcaatgg
gaaggcctgatcgagttgctgggctcggaatcgaagatctctggtggtctcgattttctt
cacaagtatagagatttcaagagatcactgaagctagtccatgatggaaaaagtatagat
gcagctcatgaagccgtggagagacttgtatcgctaatgaagagcccttctactcctcaa
cgattctggcttcctcttctgcatgattcattgaagctgttgaattggccagaacggtcg
ctgttgaatgtaacacagacgaacctgatgctgaacaaattacaagagatatcaattgca
aggttaagaccaggcttcatagaaactgatttgtcagctcaagctgtgggttctgtgaga
gttgctctagcaaccaatcttggacgtgcttttcttgaagaatgttag
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