Camelina sativa (false flax): 104721895
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Entry
104721895 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: WD-40 repeat-containing protein MSI5-like
KO
K10752
histone-binding protein RBBP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104721895
03083 Polycomb repressive complex
104721895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104721895
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104721895
Histone modification proteins
HAT complexes
HATB complex
104721895
HDAC complexes
Sin3A-HDAC complex
104721895
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104721895
PRC2.2
104721895
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104721895
Heterochromatin formation proteins
Other heterochromatin formation proteins
104721895
Chromatin remodeling factors
NuRD complex
104721895
NuRF complex
104721895
NuRF complex (fruit fly)
104721895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_LRRK2
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104721895
NCBI-ProteinID:
XP_010438274
LinkDB
All DBs
Position
11:6066230..6069926
Genome browser
AA seq
490 aa
AA seq
DB search
MESEEAAATIQATRPRRRVSRAPVTAIVPKTRVRKPKKNGESSQSPFSQQQSHKATVEDK
FSQWKALVPILYDSFANHALVWPSLSCRWGPELEQAASKTQRLYLSEQTNGSVPNTLVIA
NCEAVNRQLNGAAHSSLVKKYKTIIHPGEVNRIRELPQNNKIVATHTDSPNVLIWDTETQ
PDRYAVPGAPNSCPDLLLTGHQDNAEFALAMCSTEPFVLSGGKDKSVVLWNIQDHIRMAG
MDSKSPGSSFKQTGEGGDKTGCPSVGPRGVYHGHEDTVEDVAFCPSSAQEFCSVGDDSCL
MLWDAXTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGS
PVYTFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNLWDYDRVGKKSERAPKSPDGLFFQH
AGHRDKVVEFHWNVVDPWTIVSVSDNCESSGGGGTLQIWRLSDLIYRAEEEVLTELEKFK
SHVFTCTSKP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaagaagctgctgcgactattcaagccaccaggccgagaagaagagtatcc
agggctccggtgacggccattgtgccgaagacgagagttcgtaaacccaagaaaaatgga
gagtcttctcagtcaccgttttctcaacagcagagtcacaaggccactgttgaggataag
ttttctcagtggaaggctcttgttcccattctctatgattcgtttgccaaccatgccctc
gtctggccctctctctcttgcagatggggaccagagcttgagcaagcagcttcgaagact
caacgtctctatctctcggaacaaactaacggcagtgtgcctaatactttggtcatagcc
aattgcgaagctgttaataggcagcttaatggagcggctcactcttcattggtgaagaag
tacaagaccatcatccaccctggagaggttaacagaatcagggaactcccgcaaaataac
aagattgtagctactcacaccgacagtcctaatgttctcatttgggacactgagactcaa
ccagaccggtatgctgtgcctggagctccaaattcttgtccggatttgttactaactggg
catcaggataatgctgaatttgctcttgcaatgtgctcaacagaaccttttgttctctct
ggaggcaaggacaagtccgttgttttgtggaatatccaagatcatatcagaatggctggt
atggattccaaatcgcctggatcaagcttcaaacagactggtgaaggtggtgataaaact
ggttgtccttctgttggccctcgaggcgtatatcatggtcacgaggatacagttgaagat
gtggcattctgtccatctagtgcacaggaattctgcagtgttggtgatgattcttgccta
atgctatgggacgcanaaactggcactagtcccgccatgaaggttgagaaggcacatgat
gctgatcttcattgcgtcgattggaatcctcatgacaacaatttgatcctgacagggtca
gcagataacactgtccgtgtgtttgaccgccgaaacctgacctcaaatggagttggttca
cctgtctacacatttgaaggccacaaagctgctgttctttgcgttcagtggtctcctgat
aaatcatctgtgtttgggagttccgcagaagatggtctcttgaacctttgggattatgat
agggttggtaagaagtccgagcgtgcacccaaaagtcctgatgggcttttcttccagcat
gctggtcacagggacaaagtggtcgaattccactggaacgtagtggacccttggactatt
gtcagtgtttctgataactgtgaaagtagcggtggaggtggaacattgcagatatggcgg
ttgagcgacttgatttacagagcggaagaggaagtcttaacagagctagaaaagttcaag
tcacatgttttcacatgtacctccaagccttga
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