Camelina sativa (false flax): 104722050
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Entry
104722050 CDS
T05044
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104722050
04121 Ubiquitin system [BR:
csat04121
]
104722050
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104722050
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104722050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Sof1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
eIF2A
Beta-prop_Vps41
Beta-prop_WDR19_1st
PROPPIN
VID27
Beta-prop_IP5PC_F
WDR54
Motif
Other DBs
NCBI-GeneID:
104722050
NCBI-ProteinID:
XP_010438449
LinkDB
All DBs
Position
11:6875028..6878341
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AA seq
452 aa
AA seq
DB search
MKIKTLSRSVDEYTRERSQDLQRVFHNFDPSLRPMEKAVEYKRALTAAKLEKIFARPFVG
AMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTVSTD
GNVLVSCGTDCTVRLWKVPRPTLEDSSVSSENFIEPAAEYVWKNAFWAVDHQFEGELFAT
AGAQLEIWNHNRASPVQSFQWGTDSVISVRFNPGEPDILATSASDRSITIYDLRMSSAAR
RIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDGRKMDEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVLSGSDDTNLRLWK
AKASEQLGVILPREQKKHEYNEAVKNRYKHLPEVKRIVRHRHLPKPIYKALGIIRTVNDS
KRRKEDRRRAHSAPGTIVTKPLRQRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaagacgttatcgagatcggttgatgaatacactcgagaaagaagtcaggat
cttcagagggtctttcacaactttgacccaagtcttcgacctatggagaaggctgtggaa
tacaagagagctcttactgctgccaaattagaaaagatatttgcaaggccttttgtagga
gcaatggatggtcatcgtgatggagtctcgtgtatggctaagaacccaaattacctcaag
ggaatcttctcagcttctatggatggagatattcgtctttgggatatctcttcaaggcgt
acagtttgccaattccctggtcatcaaggtgctgtgcgtggccttacagtgtcaactgat
ggcaatgtattggtttcatgcggaactgattgcaccgttcgtctgtggaaagttcctcgt
cctacacttgaagattctagcgtttcatctgaaaatttcattgagccagctgcggaatat
gtctggaagaatgctttctgggctgttgatcatcagtttgaaggtgagctttttgctacg
gcaggagctcaactggaaatatggaatcacaatagagcttcgccagttcagagtttccag
tggggaacagactctgtaatatctgttcgctttaatccgggagagcctgatatattggct
acatctgctagcgaccgtagcataaccatatatgatctccgcatgtcttctgcagcaagg
agaatcattatgatgacaaaaacaaattcaattgcatggaaccccatggagcctatgaac
ctgacagctgctaatgaagatggaagttgctatagctttgatggtagaaagatggacgaa
gccaagtgcgtgcataaagatcatgtttctgcagtgatggatattgacttttcaccaact
ggtcgtgaatttgttactggttcatatgatcgatccgtgagaatcttcccatacaatgga
ggtcacagcagggaaatctaccatacgaagaggatgcagagagtattctgtgtcaagtat
agctgtgatgctacatatgtattatcgggcagtgacgacaccaatctcaggctatggaag
gcaaaagcatcagaacaattgggagttattcttccaagggaacaaaagaagcatgagtac
aatgaggctgtcaagaaccggtacaagcatcttcctgaggtcaagcgcattgtgagacac
aggcacttgccaaaaccaatatacaaagcattggggatcatccgaactgtgaacgattca
aagagaagaaaagaagaccgaaggagagctcacagtgctccaggaacaattgtcacaaaa
cctctgcgccaaagaagaattatcaaagaagtggagtga
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