Camelina sativa (false flax): 104722100
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Entry
104722100 CDS
T05044
Name
(RefSeq) protein TSS isoform X3
KO
K03255
protein TIF31
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csat03012
]
104722100
Translation factors [BR:
csat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104722100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_8
CLU
TPR_MalT
TPR_9
Motif
Other DBs
NCBI-GeneID:
104722100
NCBI-ProteinID:
XP_010438507
UniProt:
A0ABM0UAZ8
LinkDB
All DBs
Position
11:7022215..7031526
Genome browser
AA seq
1800 aa
AA seq
DB search
MAPKAGKTKPHKSKGEKKKKEEKVLPTVIEISVETPDESQVTLKGISTDRILDVRKLLAV
HIQTCHFTNFSFSHQVRGTRLKDSVDIVSLKPCHLTIVEEDYTEEQATAHIRRLLDIVAC
TTAFGPSKPPVIRTPPKDSEKKESNSTEGDSPADKDAVISGSGLSPKSQAAEGADKGEIN
MCPPTRLGQFYDFFSFSYLTPPIQYIRRSVRPSKEDKGLDDLFKIDVKVSSGKPFTVNAT
RTGFYPAGKQQLLCHSLVELLQQISRPFDAAYDALMKAFIEHNKFGNLPYGFRANTWVVP
PVVADSPSTFPSLPVEDETWGGDGGGVGRSGKHDQRKWAKEFAILAAMPCKTPEERQVRD
RKAFLLHSLFVDVSVFKAVETIKNVLESNQRLPKDPAALAFHEERIGDLIIRVARDDPDA
SAKLDRKSDGTQVLEISQEELAQRNLLKGITADESATVHDTSTLGVVVVRHCGCTAIVKV
SPEFNLNGGHILQDIDIEDQSEGGANALNVNSLRTLLHKSSTPRTPNADLEQTRVAKSLV
RKVFEDSVKKLEIEPSRNSKPIRWELGACWVQHLQNQASSKSDSKKTEDAKPEPAIKGLG
KQGALLKEMKRKIDVKANKTEQGKEDTDNKSETEDQKELERQNEELEKVWKELVTETAYQ
RLKESETGFHLKSPKELIEMARKYYADTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQ
MHSLGRVVELADKLPHVQSLCIHEMVVRAYKHILQAVVAAVENTADVATSIATCLNVLLG
TPSDTESTYDEKIKWTWVELFISKRYGWDWKHEGCQELRKFAILRGLSHKVGLELVPKDY
EMDTSYPFKKFDIISMVPVYKHVACSSADGRSLLESSKTSLDKGKLEDAVNYGTKALAKL
VAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDL
AVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGMKNAHVALRYLH
EALKCNQRLLGADHIQTAASYHAIAIALSLMDAYSLSVQHEQTTLQILQAKLGPEDLRTQ
DAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVSDLLDYITPDSGIKARDAQRK
CRPKVKGKPGQSPGPVSEENQKDDEILSPAHITGESSSDKENKSEAKSEEKKVEKIDIEP
QNQMKLVKPEATVQEDDDSDEGWQEAVPKNRYPSGRRTRPSLAKLNTNFMNVTQQISRSR
GKSTNFTSPKTSSVELSISVGGSTSSHASKMSVKNTSLNRKPNSSNIVGERPVNDKPAMA
IPASTEHVSKPTPMVSPVNVKAGKLFSYKEVALAPPGTIVKLAAEQLPEETKSPESLDTE
KIAVDGPQKVNAQDAESENKHVATETEAENTNNGERGRVVVGVSDLTSSPKEIKFVEAVK
AAEETFPTETAISNTRQGKPESAPTAEDSNASLLNKSPTPKDSNGSGSAIGVKLQKDLSD
TELKTVDGETENLPNGDSSPKSSIAADGEKQDACEAQKEMSKKLSASAPPYTPTTIPIFG
SIAVPGFKDHGGILPSPLNMPPMLPVNHVRRSTPHQSVTARVPYGPRLSGGGYNRSGNRV
PRNKPSFPNSTESNGEANQFNGPRIMNPHAAEFIPSQPWVSNGYPVPPNGYLASPNGAEI
TQNGYPLSPVAGGYPCNMSITQPQNGLSIHAPLSLEELPGAESSEEKSGSEEESNNEKKA
GEEEVIAQATTDTLENGHLTVGEVETTSHETSDGKNGEKQEGKCWGDYSDNEIEQIEVTS
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atggctcctaaagctgggaaaactaagccacacaagagtaaaggagagaagaagaagaag
gaagagaaagttttgcccactgtcattgagataagtgtggaaacaccagacgaatcccaa
gtgacactcaagggtatctccacagacagaatcttagatgtaaggaagctcttggcggtc
catattcagacctgccacttcaccaacttttctttctctcaccaggtgcgtggcactaga
ctcaaggactccgttgacatcgtatcgcttaagccctgccacctcaccatcgtcgaagag
gactatacggaggagcaagccaccgcgcacatacggcggctcttagacatcgtcgcttgc
accaccgcattcggtccgtcaaaaccgccggtgattcgtacacctcccaaggattctgaa
aagaaagaatcaaattcgactgagggagattctccggccgataaggatgcagttatttca
ggttccggtcttagccctaagtctcaggcggcggaaggcgccgataagggtgaaatcaac
atgtgcccaccgactcgtctcgggcagttttacgattttttctccttctcttaccttact
cctccgattcaatatattagaaggtctgttcgtccatctaaagaggataaaggattagat
gatttgtttaaaatcgatgttaaagtttcaagtgggaagccgttcactgttaatgcaaca
agaacaggtttttatccagctgggaaacagcaactcctgtgtcactccttggttgagctg
ctgcaacagattagccggccttttgatgcggcttatgatgctcttatgaaagctttcatt
gagcacaataagtttggcaatcttccttacggttttcgagcaaacacttgggtagttcct
ccggttgttgcagatagcccatctacttttccgtcacttccagtggaagatgagacatgg
ggaggggatggtggtggagtgggccggtctggtaagcatgatcagaggaagtgggcaaag
gaatttgcgattttggcagcaatgccctgtaaaacacctgaagagagacaggttcgagat
aggaaggcctttttactccacagtctatttgtcgacgtttcagttttcaaagcagtggaa
actataaaaaatgtactagagagtaatcaacgcttaccaaaggatcctgctgcattggct
ttccatgaagaaagaataggtgatttaattataagggtggctagagatgatcctgatgca
agtgccaagcttgaccgaaagagtgatgggacccaggttctagagatctctcaggaagaa
cttgctcaaagaaatttactgaaagggatcactgctgatgagagtgcgacagttcacgat
acgtctaccttgggggtggtggttgtaagacactgtggctgtacagccattgtaaaggtt
tctcctgaatttaacttgaatggtggccacatcctacaggatattgacattgaagaccaa
tccgaaggaggtgcaaatgcactgaatgtaaatagcttgagaactctattgcacaagtcg
tcaacgccgagaacaccaaatgcagacttggaacaaacacgtgttgctaaatcacttgtg
aggaaagtatttgaggatagtgtgaagaaattggagattgaaccctcaagaaatagtaag
cctataaggtgggaattaggagcttgttgggtgcaacatctgcaaaatcaagcttcaagt
aaaagtgattctaagaaaactgaagatgccaagcctgaaccagctattaagggtcttggg
aagcaaggtgcactgctgaaggagatgaaaaggaagatcgatgtgaaagctaacaagact
gaacagggcaaagaggacactgataataaatcagaaactgaggatcaaaaggaactcgag
agacaaaatgaggaattggaaaaggtttggaaagaactagtgacagaaactgcatatcag
cgccttaaagaatcagaaactggttttcatctcaagtcaccaaaagagctgattgagatg
gcccgtaaatactacgctgatactgctcttccaaaattggtggcagactttggatctctt
gaactctcacccgtcgatgggagaactctaacagactttatgcataccagaggcttgcaa
atgcattccttagggagagtggtcgagttggctgataagctccctcatgtgcaatccctc
tgtattcatgaaatggttgttcgggcatacaagcatattttgcaggcggttgtagcagct
gttgaaaacaccgctgatgtggccacctcaatagcaacatgcttaaatgtcttattggga
acaccgtctgacactgagagtacatatgatgaaaagataaagtggacctgggtggaactg
ttcatttccaagaggtatgggtgggattggaagcatgaaggctgccaggaactgagaaaa
ttcgccattcttagaggattgtcacacaaggttggactggagcttgttcctaaagactat
gagatggacacgtcatatccttttaagaagtttgatataatcagtatggttcctgtgtat
aagcacgtagcatgttcatctgctgatggacgcagtttgttggaatcatccaaaacctct
ttagataaaggcaaactggaggatgcggtcaattatggcaccaaggcattagcgaagctt
gtagcagtgtgcggtccataccatagaatgaccgctggagcatatagtcttctcgctgtt
gtactgtaccatactggggattttaaccaggctaccatatatcagcagaaagctctcgac
ataaatgaaagggaacttggacttgatcacccagacacaatgaaaagctacggcgacctg
gccgtcttctattatcgtcttcagcatacagagttagccttgaagtatgtcaaccgtgca
ttgtatcttttgcatctaacatgtggaccatcacatccaaatacggctgccacttatatt
aacgtagcaatgatggaagaaggtatgaagaatgcccatgtggctttaagataccttcat
gaagcgttaaaatgtaaccaaagactacttggagctgatcatatccagactgctgcaagc
taccatgcaattgctattgctctctctttgatggacgcatactccttgagcgtccaacac
gagcagaccactctacagattctacaagcaaaactaggccctgaggatcttcggacgcag
gatgcggctgcgtggcttgaatatttcgagtctaaagctctggaacagcaagaagctgcg
cgaaatggtactcccaagccagacgcctctatttcaagcaaaggccatctcagtgtatca
gacctgttggattacataaccccggattctggtattaaagcgagagacgctcaaaggaaa
tgtcgcccaaaggtcaaaggaaaaccaggacaaagtccaggacctgtctccgaagaaaat
cagaaagatgatgaaattctgagtccggctcatatcactggggagagttcaagtgataaa
gagaacaaatccgaagcaaaatctgaagaaaaaaaggttgaaaaaattgatattgaacct
caaaaccagatgaagttggttaagcctgaagccacagtccaggaggatgatgactcagac
gaaggatggcaagaagctgtcccaaaaaatcgttatccttctgggcgtagaactcggccc
agcctggcaaagctgaacacaaacttcatgaacgtgacccagcagatatcaagaagcaga
ggaaaatccaccaatttcacatccccgaagactagttctgttgagctttcaatttctgtt
ggtggttccacttcttcgcatgcctcgaagatgtctgtaaagaacacgagtttgaacaga
aagccaaacagttccaatatagtgggagaaagaccagtcaatgataaaccagcaatggca
atcccagcttccactgaacacgtcagcaagccaaccccgatggtgagtcctgtgaatgtc
aaagctggaaaactgttttcctataaggaggttgcactggcaccccctggaacgattgta
aaattagctgcagagcagttgccagaagaaactaaatccccagaaagtttagatacggaa
aaaattgcagtagatggtcctcaaaaagttaacgctcaggatgctgagagcgagaataag
catgtggctacagaaacggaagcagaaaacactaataacggtgagcgaggaagggtggtt
gttggtgtatcagacttgacgagctcacccaaagaaatcaagtttgtggaggccgtaaag
gcagctgaagaaacatttccaacagagacagccatatcaaatacaagacaaggaaaacct
gagagtgcaccaacggctgaggattcaaatgcatctctcttgaataagtcaccaacacca
aaagattcaaatggcagtggatcagcaattggagtaaagctccaaaaggatttatctgat
actgaactgaaaacagtagatggcgaaacagaaaacctgcctaacggagactcgagtcca
aagtcttcaatagctgcagatggagaaaagcaagacgcatgcgaagcacaaaaagagatg
agcaagaagctctctgcttctgcgccgccgtataccccaacaaccattccaatttttgga
tcgattgcagttccaggattcaaagaccacggtggaatccttccctctccattgaatatg
ccaccaatgcttcctgttaaccatgtccgcagatcaactcctcatcagtctgtaacagct
cgagttccctatggacctaggctctcaggtggtggttacaatcgatctggaaacagggtt
ccgcgtaacaaaccaagcttccccaatagcactgagtccaatggtgaggctaatcaattc
aatggcccaagaataatgaacccccatgcggctgagttcatacctagtcaaccttgggtt
tctaatgggtatccagtgccaccaaatggctatttagcatccccaaatggagcagaaata
acacagaatgggtacccgctgtcgcctgtagcaggtgggtatccgtgtaacatgtccatt
acacagcctcagaatggacttagcatacatgcaccactttctttggaggaattacctggt
gctgaaagctctgaggagaagagcggaagcgaagaagaaagcaacaacgagaaaaaagct
ggagaggaagaagtcattgcacaagcaaccacagatacacttgaaaatggacatttgaca
gtaggtgaagtggaaaccacatcacatgagacctctgatgggaaaaatggagaaaaacag
gaaggcaagtgctggggagattacagcgataatgaaatcgagcaaattgaagttacaagt
tga
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integrated database retrieval system