Camelina sativa (false flax): 104722284
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Entry
104722284 CDS
T05044
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104722284
Enzymes [BR:
csat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
104722284
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104722284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
TRM5-TYW2_MTfase
RsmF-B_ferredox
FtsJ
Motif
Other DBs
NCBI-GeneID:
104722284
NCBI-ProteinID:
XP_010438726
LinkDB
All DBs
Position
11:complement(7883829..7887987)
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AA seq
647 aa
AA seq
DB search
MAALTRNKKNRTNSQTPPLNKRTKSSPLKKAAKSQKPPLKKQRRCIPEEKPVIATDEEEE
EEIEQSNQGDEGSESGSDFFSDGDGEDVNDDGGADDLLFGSDDEEGTLGSDSDESDIEIK
SRAIDKKRKKEEKDAKDEFTMNIKEQPDEFQLPTKKELEAEARGAPDLPSLQIRIREIVR
VLSNFKDLRPDGAKRTDYVDQLKADLCSYYGYNEFLIGTLIEMFPVVELMELIEAFEKKR
PTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKEVGLIVYDSQVPIGATPEYLAGFYM
LQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYVAALMKNTGIIYANEMKVPRLKSLCA
NLHRMGVTNTIVCNYDGRELSKVLGQNSVDRVLLDAPCSGTGVISKDESVKTSKSADDIN
KFAHLQKQLILSAIDLVDANSKTGGYIVYSTCSIMIPENEAVIDYALKKRDAKVVPCGLD
FGQPGFSSFREQRFHPSVEKTRRFYPHVHNMDGFFVAKLKKMSNAMQPTETDKPVETMRQ
AQVSSSDDDEEAEAIEDLKKPSVANGQPKRESNTKEYKNRQKFPRSKETHKGRRNTRIKS
ESGSGTVEEPRKQKKKRSQWKNEIAQAREEKRNAMRENAKERPKHRK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctgacgcgtaacaagaagaataggacaaattcacagactcctccactgaat
aagcggaccaagtcgtctccattgaagaaggcggcgaaatctcagaagcctccgttgaag
aagcagaggagatgtattccggaggagaagcctgtaattgctacagatgaggaggaagaa
gaggaaattgaacagtccaatcaaggagatgaagggtctgaatcaggttctgactttttc
tcagatggtgatggagaagacgtaaatgatgatggtggtgctgacgacttgctttttggt
agcgatgatgaggagggaactttgggttctgactctgatgagtccgatattgagatcaaa
tctagagctattgataaaaaacgtaaaaaggaggaaaaagatgcaaaagatgaattcaca
atgaacattaaggaacagcctgatgagtttcagctaccaaccaaaaaggagcttgaagca
gaggcacgtggggcaccagatcttcctagcttacaaataaggattagagagattgttaga
gtgctgtcgaattttaaggatttgaggccagatggagccaagaggacagattatgttgac
cagcttaaagctgatctttgttcttattatggctataatgagtttcttattggaactttg
attgagatgtttcctgttgttgaactcatggaactaattgaagcttttgaaaagaaaagg
cctacatctatacgtactaacactcttaagactcggagacgggatctggctgatgtactt
ttgaacagaggagttaatctagacccattaagcaagtggtcaaaagaagttggacttatc
gtttatgattcacaagttccgattggtgcaactcctgaatatttggctggtttctatatg
ttgcaaagtgctagttccttcttgccggtgatggcccttgctcctcaagaaaaagagcga
gttgtggacatggctgcggcccctggtggtaaaacaacttatgttgctgcactaatgaag
aatacaggcataatatatgcgaacgagatgaaagtacctaggctaaagtcactttgtgcc
aatctgcatcgcatgggagtgacaaatactatagtttgtaactatgacggaagagagcta
tccaaggttttaggtcagaactcggttgatagagtattgctggatgctccttgcagtgga
actggagttatatcaaaagatgaatcggttaaaacttccaaaagtgctgatgacataaat
aaatttgctcatttacaaaagcaacttatacttagtgcgattgatttggtagacgccaat
tccaaaactggtggatatattgtttattcaacatgctccattatgattcccgagaacgaa
gctgttatcgattatgcccttaaaaagagggatgctaaagtcgttccatgtggacttgat
tttggccaaccaggatttagtagttttagagaacagcggttccatccttctgtagagaag
actagacgtttctatcctcacgtacacaacatggacggattctttgttgcaaagctgaag
aagatgagcaatgcaatgcagcctacagaaactgataagccagttgaaacaatgaggcaa
gcgcaggtgtcgtctagcgatgatgatgaagaggctgaggccattgaggatttgaagaaa
ccttctgttgcaaatgggcaacccaagcgagagagtaacacaaaagaatacaagaacaga
caaaaatttccaaggtcaaaggagactcacaaaggcagaaggaatacacgcataaaaagc
gaaagtggtagtggtactgtggaagaaccaaggaagcaaaagaaaaagagatcacaatgg
aagaatgaaattgctcaagctagggaagagaaaagaaatgccatgagagagaatgctaag
gagaggccaaagcacagaaaataa
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