Camelina sativa (false flax): 104722414
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Entry
104722414 CDS
T05044
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104722414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104722414
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104722414
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
104722414
NCBI-ProteinID:
XP_010438868
UniProt:
A0ABM0UZ34
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Position
11:complement(8494205..8497145)
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AA seq
200 aa
AA seq
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MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLTSKLGGNSAALVPDWKVGECVATWW
RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFHFNMISS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtctcaggtggtgaacacgtacccgctttcgaactacagtttcggaactaag
gaacctaagctggagaaggacacctctgtcgccgaccgactcgctcgtatgaaaatcaac
tatatgaaggaaggcatgaggactagcgttgaagggattctactggtacaagaacacaac
catcctcatatacttctcctgcaaattggtaacacattctgcaaacttccaggtggacgc
ctgaagccgggagaaaatgaagttgatggcctgaaaagaaagttgaccagtaagcttgga
ggcaattcggctgcacttgtacctgactggaaggtaggagaatgtgttgcgacatggtgg
cgtccgaactttgaaaccatgatgtacccgtattgccctcctcacattacgaaaccaaag
gaatgtaagagactctacattgttcacttgtctgagaaagagtactttgctgtgcccaaa
aacttgaaactcttggccgtccctttgtttgagctctatgacaatgttcagagatatgga
ccggttatatcaaccataccccaacagctatccagatttcatttcaacatgattagttcg
tga
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