Camelina sativa (false flax): 104722424
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Entry
104722424 CDS
T05044
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
csat
Camelina sativa (false flax)
Pathway
csat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104722424
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csat02000
]
104722424
Transporters [BR:
csat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
104722424
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_30
RsgA_GTPase
AAA_29
AAA_5
AAA_25
AAA_21
AAA_28
Zeta_toxin
TsaE
AAA_15
Motif
Other DBs
NCBI-GeneID:
104722424
NCBI-ProteinID:
XP_010438880
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All DBs
Position
11:8559873..8564209
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AA seq
713 aa
AA seq
DB search
MASATTLLFHHGSTRVVVARRRCQGSVLRTCGPKPFLSFRSLPDSTAQFRPLLRAKSNGL
VRAYVTGAPPIVDEPDPKIEESKSEAVSRDLISWGLVWSLLDKHKLRLVVCLLTLVGCST
CTLSMPIFSGRFFEVLIGARPDPLWRLLTKIAVLYSLEPIFTIAFVTNMNAIWENVMATL
RAQIFRRVLIQKAEFFDKYKVGELTGLLTSDLGALNSLVNDNISRDRGFRAFSEVFGTIC
ILFTLSPQLAPVLGLLMLAVSVLVAVYKRSTASVYKAHGLAQATMSDCVSETFSAIRTVR
SFSGEKRQMSLFGSQILAFQRSGLKLGTFKSINESITRVAVYISLLALYCLGGSKVKTGE
LAVGTVVSFIGYTFTLTFAVQGLVNTFGDLRGTFAAVDRINSILNAVDIDEALAYGLERD
IHTKKVQDENLRLFLSSGPNVNIRHLDNYYMSDLKSTNNLRTLTWAGDVCLEDVHFAYPL
RPDVKVLDGLSLTLNSGTVTALVGSSGAGKSTVVQLLARFYEPTQGRITVGGEDVRMFDK
SEWARVVSIVNQEPVLFSLSVAENIAYGLPNAHVSKDDIIKAAKAANAHDFIISLPQGYD
TLVGERGGLLSGGQRQRVAIARSLLKNAPILILDEATSALDAVSERLVQSALNRLMKDRT
TLVIAHRLSTVQSAHQIAVCSDGKIIELGTHSELVAQNGSYASLVGTQRLAFE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaaccacactcctcttccaccacggttctactcgagtcgtcgtcgctcgt
agacgttgccaagggtctgtccttagaacgtgtggaccaaaaccgtttctttccttccgc
agcttacctgattccaccgcccagttccgtcctttgttgagagcaaaatccaatggattg
gtgcgggcctatgtcactggagcgccacctatcgtagacgaaccagacccaaagattgaa
gaatccaaatctgaggctgtatcgagggatttaatcagctgggggcttgtgtggagcttg
ttggataagcacaaacttagactcgttgtttgcttattgactctcgttggctgcagcact
tgcactctctctatgcctatcttttctggtagattctttgaagtattgattggggcgaga
ccggaccctctatggcggctactgaccaaaatcgctgttttgtactcgttggaacccatc
tttactattgcttttgtcaccaacatgaatgctatctgggaaaacgttatggcaacctta
cgagctcagatttttagaagggttttgatccagaaggcagagtttttcgacaaatataag
gtaggagagttgacgggacttctcacgtctgatcttggtgctctgaatagccttgtgaat
gataacatctcccgagatcgtgggtttagagcattttctgaggtttttggaacaatctgc
attctttttactctctcacctcagcttgcacctgtgcttggtctattgatgcttgctgtt
tcagttttagttgctgtatacaagaggtcgactgcttcggtttataaagcacatggatta
gcccaagcaaccatgtctgattgtgtatcagaaacgttttctgcaatccgaactgtaaga
tcattcagtggtgaaaaacgtcagatgtctctattcggcagccagattcttgctttccag
cgtagcggcttaaagcttggtactttcaaatcgataaatgaatctataacaagagttgct
gtttatatttcactgttggctctttactgtcttgggggaagcaaggtgaagacgggtgaa
ctcgctgttggaacagttgtttcattcattggatacacatttactctaacatttgctgtc
caagggcttgtaaacacgtttggagatctacgtgggacttttgctgctgttgacaggatc
aattccattttaaacgcggttgatattgatgaggctcttgcctacgggttagaaagagat
atacatacaaagaaagtccaagacgaaaaccttagattgtttttgtcttctggcccaaat
gtgaatatccgtcacctcgacaattactacatgtcagatctgaaatcaactaacaattta
cgtaccctaacatgggctggagatgtctgtcttgaagatgtacattttgcttatcctcta
cgacccgacgtaaaagttcttgatgggctcagtttgacgttgaattctggtaccgtaact
gctcttgttggctctagtggtgcgggaaaaagtactgtcgtacagttattggcacgcttt
tatgagccaacacaaggacgcattactgtgggtggagaggatgtgaggatgtttgacaag
agtgaatgggctagggttgtttcaattgtaaatcaggaacctgttctcttttctctctcc
gtggccgaaaatattgcatatggtctccccaatgctcatgtgtccaaggacgacatcatt
aaggcagccaaagctgccaacgctcatgacttcataatctcacttcctcagggctacgat
acactggttggtgaaagaggaggcttgcttagtggaggccaaagacagagagttgccata
gctcgatctctgttgaagaatgcccccatcttgattctcgatgaggcgacaagtgcgctt
gatgcagtgagcgagcgtttagtacagagtgcgttgaaccgcctgatgaaagacaggaca
acactagtgatcgctcacagattgagcacagtccagagcgcgcatcagattgcagtatgc
tctgatggaaagatcatagagctaggaacacattctgaattggtggcgcaaaatggatcg
tatgcttcacttgttggcactcagaggctggcctttgagtaa
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