Camelina sativa (false flax): 104722501
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Entry
104722501 CDS
T05044
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104722501
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104722501
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104722501
NCBI-ProteinID:
XP_010438969
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Position
11:8954405..8956350
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AA seq
408 aa
AA seq
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MKMQTKKLFITIVSFLLYAPLFLSSPVPDPESVVEEVHKSINASVAARRKLGYLSCTTGN
PIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGDDNPVTPKPGTLRHA
VIQDEPLWIIFQRDMTIRLKEELIMNSFKTIDGRGVSVHISGGPCITIQYVTNIIIHGIH
IHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCEDGLIDAIMGST
AITLSNNHMTHHDKVMLLGHSDTYTRDKNMQITIAFNHFGEGLVQRMPRCRHGYFHVVNN
DYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKSWNWRSSGDLLL
NGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTFSSGALNCRKSSRC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcagacgaagaagctctttatcaccattgtctcctttcttctctacgctcca
ttgttcttatcttcaccagttccagaccctgaatctgttgttgaagaagttcacaagagc
attaatgcgtccgttgctgcaagaaggaagttaggttatctctcatgtacgaccggtaac
ccaatcgacgactgttggcgttgtgaccctcactgggagcaacaccgtcaacgtctcgcc
gactgcgccattggtttcggcaaaaacgctatcggtggccgtgacggtcggatctacgtt
gtcaccgactcaggagacgacaacccagttacccccaaacccggaactttgagacacgcc
gtgatccaagacgagccgctctggatcatcttccagcgagacatgacgattcggctcaaa
gaagagctcatcatgaactctttcaagaccatcgacggtcgtggcgtctccgtacacatc
tctggtggtccttgtatcacgatccagtacgtgaccaacattatcatccatgggattcat
atccatgactgtaagcaaggtgggaacgctatggtacggagctccccaaggcacttcggg
tggagaacgatatcggacggtgatggtgtctctatctttggtgggagtcatgtttgggtt
gaccattgctcgctctctaactgtgaagacggactcattgatgctatcatgggctcgacg
gctataactttgtctaacaatcacatgacgcatcatgataaggtcatgctgcttggtcac
agtgatacttacactcgtgacaagaatatgcaaatcaccattgcgtttaaccattttggt
gaaggacttgtccaaagaatgccaaggtgtagacatgggtacttccatgtggtgaacaac
gactacacacattgggagatgtacgcgattggaggaagtgctaatcctacaatcaatagt
caagggaacagattcttggccccaaacatcagattcagcaaagaagtgactaagcatgag
gacgcgcctgagagcgagtggaagagttggaattggagatcttctggagatttgttgcta
aacggtgcgttttttactccatcaggtggtgcagcctcgtctagctatgcaaaggcctct
agccttggtgctaaaccgtcttctctcgttggaccattgacgtttagctctggtgcactg
aattgccgtaagagttcccgttgctga
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