Camelina sativa (false flax): 104722548
Help
Entry
104722548 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104722548
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104722548
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104722548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
104722548
NCBI-ProteinID:
XP_010439043
LinkDB
All DBs
Position
11:complement(9206719..9210812)
Genome browser
AA seq
647 aa
AA seq
DB search
MSNQYSVQLDVHENHVVIGNGIVQVAISKPDGCVTGISYQGVDNLLEIRNKDHDRGYWDL
VWSEEGATGTTGTFERTKGTSFEVVVENEELVEVSFSRKWDFSLQDSIAPINVDMRYIMR
KNVTGFYSYAIFEHLPEWPAVNLPQIRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKR
GRTLDFPEAVLLVHPVEEEFKGEVDDKYEYSCENKDLKVHGWISDNLNLGCWQIIPSNEF
RSGGLSKQNLTSHVGPISLAMFLSAHYAGEEMVLKLKAGESWKKVFGPVFTYLNCLPDKT
SDPLSLWQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGSISGRLLVCDKFLSDELLPANG
AFVGLAPPGEVGSWQLESKGYQFWTEADTDGYFAINNIREGEYNLNAYVTGFIGDYQYEQ
SINITAGCGIDVGDIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRF
RQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAQVTRKLDDDTYAKTTWQIKFKLEKVQ
NNSTYKIRISLAMANIAELQVRMNEDDSDQSTPMFTTGVIGHDNAITRHGIRGIYRLYNV
DVPSEKLIEGDNTLFLTQTMTTTGAFNGLMYDYIRLEAPPLDLSNSH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaatattctgttcagttggatgtccacgagaaccatgtggtgattggaaat
ggtatagtccaagtggctatatcaaaaccagatggttgtgtcaccggaatctcttaccaa
ggagtcgacaatctactagaaattcgcaacaaagatcacgatcgagggtattgggacctt
gtgtggagcgaagaaggagcaactggaaccacagggacatttgagcggaccaaaggcaca
agttttgaagtggtagtggaaaatgaagaactggttgaggtttccttctcaaggaaatgg
gatttttctctccaagacagtattgctcccattaatgtcgatatgaggtacataatgcgt
aaaaatgtaactggattctactcatatgcaatttttgagcatctacccgaatggccggct
gttaacttgcctcagataaggattgtctacaagcttcgtaaagacaagtttaaatatatg
gcgattgctgataacaggcagaggaaaatgccactcccagaagatagattgggtaaaaga
ggaagaaccttggattttcctgaagctgttcttcttgttcaccctgttgaagaagagttt
aaaggagaggttgatgacaagtacgagtattcatgcgagaacaaagatcttaaagtgcat
ggatggatctcagataacctcaatttgggttgctggcaaatcattcctagtaacgagttc
agatcaggtggcttgtccaaacaaaaccttacctctcatgttggtcccatcagtctcgct
atgtttttgagtgctcactacgcgggtgaggagatggttttgaagctgaaagcaggggag
tcatggaagaaagtgtttggtcctgttttcacttaccttaattgcttgcctgacaaaacc
tctgatcctctttctctatggcaagacgcgaaaaaccagatgttaactgaagttcaaagc
tggccttacgatttccctgcttcagaagactttccagtgtccgataagcgcggttccatt
agtggtagattactagtgtgcgacaaattccttagtgatgaacttttaccggcaaatggt
gctttcgtaggtttagctccaccaggagaggttggatcctggcagttagaatctaagggc
tatcaattctggacagaagcagatacagatggttattttgcaataaataatatccgagaa
ggcgaatataatctcaatgcttatgtgacaggatttattggagactatcaatacgaacag
tcaattaacattactgcaggatgcggcattgacgttggcgatatcgtgtatgaaccgcct
cgagatgggccaacggtgtgggaaatagggatacctgaccggtctgcagctgagttcttt
gttccagacccaaatcccaaatacatcaacaaactttatattggtcatcctgataggttt
aggcaatacgggctatgggaaagatacacagaactatatcctaaggaagatttggtgttc
accattggcgtcagtgattacaaaaaagattggttctttgcacaagttaccaggaaactg
gacgatgacacatatgcaaaaacgacatggcaaattaaatttaagctagagaaggtacag
aacaacagcacatacaaaatccggatctcgctagcaatggcaaatatagcagagttacag
gtgaggatgaatgaggatgacagtgatcagagcacaccgatgttcacaacgggtgtaatc
ggacacgacaacgcgattacaagacatgggatacgtggaatctataggctttataatgta
gatgtaccaagtgagaagcttatagaaggagacaatactttgttcttgacacaaaccatg
actaccactggagccttcaatggtctcatgtacgactatatccgcctggaagcacctcct
ttagatttatcaaactctcactaa
DBGET
integrated database retrieval system
