Camelina sativa (false flax): 104722566
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Entry
104722566 CDS
T05044
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104722566
03036 Chromosome and associated proteins [BR:
csat03036
]
104722566
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104722566
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104722566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
Lsm_interact
TPR_16
ARM_TT21_5th
UTP6_C
DUF4806
Motif
Other DBs
NCBI-GeneID:
104722566
NCBI-ProteinID:
XP_010439063
LinkDB
All DBs
Position
11:9278849..9284672
Genome browser
AA seq
817 aa
AA seq
DB search
MMMDDDTELVVRSSDQKMDVASTENPAVPQADPPSSDDSGDSDSDSEDDAESIQQIETLE
SELSSNPYNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASLASS
ENVSEIVKLYERGLSDYQSVSLWCDYLNFMLESDPLVHGYTSDGISKMRSLFERAIPAAG
FHVTEGSNIWEGYKAFEEGFLATIDEADVEEKNKQIQRIRSIFHRHLSVPLKNLSSTLST
YKAWELEQGIDLDIGSDDLNKVSPQVAAANKKAQQMYSERAHLEEHISNKDLSDTEKFQE
FMNYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLWIDYTVYLDKTLKVGKAITHAYSRAT
RSCPWTEDLWARYLLALERGSAPEKEIYAVFEKSLQCTFSSFEEYLDLYLTRVDGLRRRM
LSAKISETLDYSLIRETFQQASDYLMPHMQNPDSLLHLHAYWANLELSIGKDLAGARGVW
DSFLKKSGGMLAAWYAYIDMEVHLGHVKEARSLYRRCYTRKFDGTGSEDICKGWLRFERE
HGDLEDFDIAFQKVMPRLEELQLIRLQQESTPVKPPAGLKEHNSQKSTREKRKAGQNVED
ESLAKRQKTKGRKVNEVDVGQSATVPNIKSENGKAADSNKEESEDAKPLKPKIYTDECTA
FLSNLSVKVQEEDIRKFFSDVGGVDSIRILHHKDTGKPRGLAYVDFVNDEHLAAAIAKNR
KMFFGKKISIARSNPKKGKKEFTRRGNDGSGNSKDPSQIPEKAKGETVGEKQGDEVQLKG
KNTFAVPRSVKQLGYTNPKPSADEPTKSNDEFRNMLP
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatgatgacaccgaactagtcgtcagaagcagcgaccagaaaatggacgtc
gcttctaccgaaaatcctgccgttccccaagctgaccctccctcgtcggatgattccggc
gattctgattccgattccgaggatgatgccgagtcgattcagcagattgaaaccctagag
tcggagctctcctccaatccttacaactacgatgcttatgtccaatatataaagcttctg
aggaaaacagcaaaccttgaaaagctaagacaagcaagggaagctatgagtgccatattc
ccgttgagtccttctttgtggcttgaatgggcaagggatgaagcttctcttgcctctagt
gagaatgtgtctgaaattgtgaagctttatgaacggggactttctgattatcagtctgta
tcactttggtgtgactacctgaactttatgctagaatctgatccattagtacatggatac
acatctgatggtatttcaaaaatgaggagtctttttgaacgtgctattccggctgcgggc
ttccatgtcactgaaggcagtaatatatgggaaggatataaagcatttgaggaaggcttc
ttagccactattgacgaggctgacgttgaggaaaaaaataagcagatacaaaggattaga
agcatattccaccgtcacctgtctgttccgctaaaaaacttgagctccacccttagtact
tacaaggcttgggagttggagcaaggcattgaccttgatattggatcagatgatttgaat
aaggtttctcctcaggttgctgctgcaaacaagaaggcacagcagatgtatagtgaacgt
gcccatcttgaagaacacatatctaacaaagatttatctgacacggaaaagtttcaggaa
ttcatgaattatataaagtttgagaagacttctggagatcctacccgagttcaagctata
tatgaacgtgctgtggctgaatacccagtttcaagtgacttgtggatagactacaccgtc
tatcttgataagactttgaaggttggaaaagctataacacacgcatattctagggcgact
agaagttgcccatggactgaagatctttgggcacgttatttgcttgctttagagcgtggt
tctgcacccgagaaagagatctatgctgtctttgagaagtcattgcagtgcacattttcc
tcctttgaagagtacctggatttatacctcactcgagtagatggcctgagaaggagaatg
ttatcagctaagatatcagagactttggattattctctgataagagaaacttttcagcaa
gcatcagattacctaatgccccacatgcaaaatccagacagcttgctgcatttgcatgct
tattgggctaatttggaacttagtattggaaaggatctagctggagcacgaggtgtttgg
gatagctttttgaagaagagtggtgggatgctagcagcctggtatgcctacattgatatg
gaagtgcatttggggcatgtaaaggaagctaggtctctttaccggaggtgctatacaaga
aagtttgatggcactggctcagaagacatatgcaaaggatggttgcgatttgaaagggag
catggggatttggaagattttgacatagcatttcaaaaggttatgccacgcttggaagag
ctacagttgatcaggttacaacaggagtctacgccagtcaaaccaccagctggcctgaaa
gagcataactcacaaaagagtacacgtgaaaagagaaaagcaggacagaatgtagaagac
gagtctttggctaagcggcagaagacaaagggtcgaaaagtaaatgaagtggacgtaggt
cagagtgcaactgtaccaaacattaaatcagagaatggaaaagccgctgattcaaataaa
gaagagagtgaagacgccaaaccattgaagccgaaaatttatacagacgagtgtacagct
tttctttcaaatctcagtgtcaaggtacaagaggaagatatacgtaaatttttcagcgat
gttggtggggttgattccatccgcattctccatcacaaagacactggaaaaccaagggga
ctggcatatgttgattttgtgaatgatgaacaccttgcagcagctatagcaaagaacaga
aagatgttttttggtaagaagatcagtatagcacggtcaaatccaaagaagggtaaaaag
gaattcactcggcgtggaaatgatggttctgggaattcaaaggacccttcccagattcct
gagaaggcgaaaggagaaactgtgggtgaaaagcaaggagatgaagtgcaattgaaaggt
aaaaacacgttcgctgtcccaagaagtgttaaacaactcggctacacaaaccccaaaccc
agcgcagatgagcccacaaaatcaaatgatgagttcaggaatatgttaccttaa
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