Camelina sativa (false flax): 104722661
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Entry
104722661 CDS
T05044
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104722661
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104722661
Pre-60S particles
Other pre-60S particles
104722661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
HEAT_2
Adaptin_N
NopRA1
RIX1
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
104722661
NCBI-ProteinID:
XP_010439161
UniProt:
A0ABM0UCJ7
LinkDB
All DBs
Position
11:9862858..9870928
Genome browser
AA seq
1130 aa
AA seq
DB search
MAAFEDRADENDGIAFKDGNTDISQQLMDRYGKSSASQHRHLVATAVAMRSILTSESLPP
SPPAFFAAAISSVDSSTEDPMAVSALLTFLSIVLPLVPSGDISATMARDAVAVLVNPIDG
GVDKLGVASLRAGVKCIGTLLIGFCDLDDWESLQIGFGLLLKFAIDKRPKVRRCAQECLE
KLFGSLQSSTVIKEASNTVYILLKEYKQVLSDLSSKKIDEGSKVDSTMRPEDAEAAHVLN
VLSATIPFLSAKVSSRVFSELCKLMGSQFSPLTRQILKAIDTIFKNSEDTTVVPEIEGLV
TSLTSYLSLHDKNPADTIVHVTTLLKSALEKAYSVEPTLCLKKLPLVCGSLAGLLTSTDD
VASQASVILKDLISSHIDTNELLIEGSLPCEDEDNVTSGDNINAARCLCSVFQSALNSCD
GIPKEHILTVINLLIEKLGERSYVLAKNIILKLADLMEHATGDTSSSQYLQQCIGSAVVA
MGPVRLLALLPITLHAESHSCTNAWLIPVLRKYIIGASLEYYVDHIVPLAKSLMLASKGA
KKSAYGKELRAYGHELLRLLPAFCNYPVDVPQQFGSLAKLMVKFIKNKSFMHEAVALSLQ
MLVNQNKRMPKPSTDMDEATAISEDATTELESRFHYSKKASTKNMKALASSSTELLQTLV
DVFTASDSDISADFKAAIGCLASTLDSSVRKKILISLLNKFDPAGESETDGKVNQSNDSI
DEEEETCSATKTQLKRSAVLDLAYSFVEGAQEDLIELIYNLVRQSFKATDEADLCGAYDT
LSRVLQEHGSFCSSHFAEVIEMLVSHKTPEDAASSISRFACLHVLMAHGIQSSTEEENEK
AFLILNEIILTLKDGKEEHRKAACDALVMVYTTLKNSSSVSSDELCPKLINMITGYIDGS
SPHIRSGAVSALSALVYKDPEICLSSPELLSSVLSLLHTKSIEIIKAVLGFVKVLVSTSQ
AQDLQSLLQNLLYEILPWSSVSRHYFKSKVTIIVEIMVRKCGTRAVQLATPDKHKSFIQT
VLENRSGKSKDKEETNDSQTTSTDPSREPRKRNYREASSETTAKQDSNKFKRQKGTHQRH
TPASDINGSRTGPQRHGNRSFGKHREASENNHKSGKETRKPQKNRFRKAQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttgaagacagagcagatgaaaacgatggaattgccttcaaagatggcaac
actgatatctcccaacagcttatggaccgttacggcaagtcctcagcttcgcagcaccgt
catctcgtcgccaccgccgtcgctatgcgctccattctcacctctgagtctcttccgccg
tctcctcctgctttcttcgcagctgctatatcctctgtcgattcttccacggaggatccc
atggcggtttctgctttgcttacgttcctgtccatagtccttcctctggttccttcagga
gatatttcagctactatggctcgagatgctgtggctgttttggtaaacccaattgatggt
ggggttgataaattaggtgttgcgagtttgagagctggtgtgaagtgcattgggactttg
cttattggtttctgcgatttggatgattgggaatctcttcaaattgggtttggtttactt
ctcaagttcgccattgataaacgtcccaaggttagaagatgcgctcaagagtgtttggag
aagttatttggttctctacaatcatctactgttataaaggaagcaagtaatacagtttat
attttacttaaagaatataagcaagtactatctgacttaagctcaaaaaagattgatgag
ggttctaaggttgactcaacaatgaggcctgaggacgcagaggctgcccatgtgctaaat
gtgctcagtgctacaattccgtttctctctgccaaagttagttctagagttttttcggaa
ctttgcaagcttatgggttctcagttttcgccgttgacgaggcaaattctcaaagcgatt
gacactatcttcaagaattcagaagatacaactgttgttcctgagatagaaggacttgta
acttctttgactagttatttatctttacacgacaagaatcctgctgacacgatcgtgcat
gtgaccaccctattaaaaagtgctttggagaaagcctactcagtcgaaccgactctatgt
ctaaagaaacttccactagtttgtgggtcattggcaggccttctgacttccacggacgac
gttgcatcccaagcctcagttatattaaaagacttgatcagtagccacatcgatacaaat
gaacttctaatcgagggaagcttgccttgtgaagatgaggataacgtaacgagtggagac
aatataaatgcagcaagatgtttatgctctgtctttcagagtgccctaaactcatgtgat
ggaattccaaaggagcacattttaactgtcataaatcttttgatcgagaaacttggagag
cgttcatatgttcttgcaaagaatatcatattaaagcttgctgacttgatggaacatgca
actggagatacgtctagctcacagtatcttcagcaatgcattgggtctgcagtggtcgca
atgggaccagtaaggctactggcacttcttcctatcactcttcatgctgagagtcactca
tgcacaaatgcttggctaattcctgtcttaagaaaatatatcattggagcatctcttgag
tattatgtcgatcacattgttccacttgcaaaatcactgatgcttgcttctaaaggagct
aaaaagtcagcttacggcaaagagttgcgggcctatggtcatgaacttctgagactgtta
cctgccttttgtaactatccagttgatgtgccccaacaatttggatcgttagccaaactg
atggttaaatttattaaaaataaatctttcatgcatgaagccgtggccctttctctacag
atgcttgtaaatcagaataaaagaatgcctaagcccagtacagatatggacgaagcaaca
gccataagtgaagatgcaacaacagaactggaaagtagattccactattcgaagaaagct
tcaacgaaaaacatgaaggctttggcatcaagctcgacagagttgcttcagactcttgtt
gatgtattcactgcttcagactcagatatcagtgcagactttaaggctgcaattggatgc
ttagcttctactctggattcgtcagttaggaaaaagattctaatttctttgctaaataag
tttgatcctgctggtgaaagcgagactgatgggaaggtcaatcaatcgaatgattcaatc
gatgaagaagaagaaacctgcagtgccacaaagacacagttaaagaggagtgctgtgctg
gatcttgcatattcatttgttgaaggagcccaggaagaccttattgagttaatttataat
cttgttcgccaaagttttaaggcaaccgacgaggctgatctttgtggggcatatgatacg
ctgagcagagttctacaggaacatggttcgttttgttcatctcattttgcagaggtgata
gagatgttagtcagccataaaactccagaggatgcagcgtcttctataagtcgatttgca
tgtctccacgttctaatggctcatggaattcagtcaagcaccgaggaggagaatgagaag
gctttccttattctgaacgagataatcctgacacttaaagatgggaaagaagaacatagg
aaagcagcttgtgatgcactggttatggtatataccacccttaaaaattcatcctctgtc
agcagtgatgaactttgtcccaaattgattaacatgataacgggttatattgatggatcg
tcgccgcacataaggagtggagcagtgtctgcgttatctgccttggtatacaaagatcct
gagatctgcctatcgtcacctgagcttctttcatctgttttatcgttgcttcacaccaaa
tccattgagattataaaagctgttttgggttttgtgaaagttttagtctcaacatcccaa
gcccaggacttgcagagtctactgcagaacctcttatacgaaattctcccctggtcgtct
gtttcaagacactattttaagtcaaaggtaacgatcatagttgagattatggtaaggaag
tgcggcacccgcgcagtccaattagccacaccagacaagcacaagagtttcatccagaca
gttttagagaaccgttcggggaaatcaaaagacaaagaagagaccaatgattcacagact
acatccactgatccatccagagagccgcggaaaagaaattacagagaagcttcatcagaa
actacagccaaacaagacagcaacaaattcaaacggcaaaagggaacacatcaacgacac
acacctgcttctgacattaatggaagtagaacaggaccacagcgccatggtaacagaagc
ttcggaaaacatagggaagcttctgaaaacaatcacaagtcaggaaaagagacacgaaag
ccccagaagaacagattcaggaaagcacaatga
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integrated database retrieval system