Camelina sativa (false flax): 104722802
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Entry
104722802 CDS
T05044
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104722802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104722802
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
104722802
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
CDC45
Motif
Other DBs
NCBI-GeneID:
104722802
NCBI-ProteinID:
XP_019086988
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Position
11:10813320..10816730
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AA seq
532 aa
AA seq
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MKSEREVKNGVSEEEREVKRKRSDSPPPPLGFNNPLLPLANAYDDDDEDEENEQKKSQTR
GVVKGEGNGNKAQEEEVDDDEDDDAFKGRRKRSRNVEVRRDCPYLDTVNRQVLDFDFERF
CSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEADHHVYINLLTEKVYCLPDGYEIND
PSLDDIRHVLNPRFSRAQVEELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSL
MRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR
FRIGQQSDPVEFMSWLLNTLHMDLRPSKDASSIIHQCFQGELEVVKEYQGNENKESSRMP
FLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARMRYRITRSPP
YLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPTAPEGEKVCSKYNLIANIVH
DGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLSQMVELSEAYMQIYEQQEK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgagagagaagttaagaatggtgtttctgaggaagagagagaggtgaagagg
aagaggtctgattcgccacctccaccactgggttttaataaccctcttttgccgttggct
aatgcttacgatgacgacgatgaggatgaggagaacgagcagaagaaatctcaaactcgt
ggagttgtgaaaggagaagggaacggtaacaaagctcaagaagaggaagtcgatgacgac
gaagatgatgatgcctttaaggggagaagaaagcgttcacgcaatgttgaagttcgtcgt
gattgtccttatcttgatactgttaatcgtcaggtgttggattttgatttcgagaggttt
tgttctgtgtccttgtcaaatttgaatgtgtatgcttgtctcgtctgcggtaagtatttc
caagggaggagccagaagtctcatgcttacacgcacagtttggaagcagaccaccatgtt
tacatcaatcttctgacggagaaggtttactgtcttcctgatggttacgagatcaatgac
ccttctttggatgacattcgccatgttttaaacccaaggtttagtagggctcaagtagaa
gagctcgacaagaataggcagtggtctagggctcttgatggctctgactatcttccggga
atggtgggattgaacaacatacaaaagacggagtttgtgaatgttacaatccaatcgttg
atgagagttactcctttaaggaacttcttcctcattcctgagaattatcagcattgcaag
tctcctcttgttcaccgttttggagaactcactcggaagatttggcatgctcgaaacttt
aaaggacaggtgagtccacatgaattcttgcaagctgtcatgaaggccagcaagaaacga
tttaggataggccaacagtcagatccagttgagtttatgtcgtggctcctcaacactttg
cacatggatcttaggccttcaaaggacgccagcagtatcatccaccagtgcttccagggt
gagttggaggttgtgaaagagtatcaaggcaatgaaaacaaagaaagctccaggatgcct
tttctgatgcttgggctagatttgccaccgcctcctcttttcaaagatgtcatggagaaa
aacataattccgcaggttgctctattcgatttattgaagaagtttgatggagaaactgtg
acagaggtggttcgcccaaagctagccagaatgagatatcgtataaccagatcgcctcct
tacttgatgttccatatggttcggttcaagaagaataactttttcaaggagaagaaccct
accctggttaacttcccagtgaaggacatggagctgagggattacataccatcattgcct
acagcccctgaaggcgagaaggtgtgttcaaagtataatctaatcgctaacattgtacat
gatggtaagcctgaggatgggtacttcagagtctttgtgcagaggaagtcacaagaacta
tggtacgagatgcaggatttgcatgttgcagagacactttcccaaatggtagaactatcg
gaagcatacatgcagatatatgagcagcaggagaaatag
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