Camelina sativa (false flax): 104722881
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Entry
104722881 CDS
T05044
Name
(RefSeq) DNA-directed RNA polymerase II subunit 2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03020
RNA polymerase
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104722881
09124 Replication and repair
03420 Nucleotide excision repair
104722881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104722881
03400 DNA repair and recombination proteins [BR:
csat03400
]
104722881
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104722881
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104722881
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104722881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
104722881
NCBI-ProteinID:
XP_019087793
LinkDB
All DBs
Position
11:11326358..11334000
Genome browser
AA seq
1188 aa
AA seq
DB search
MEYNEYEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPS
TMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGE
HCETKKAYYFGYIVHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RSYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPSVIPTATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDNQRLLIKKRDIYALQQRESAEEDGWHHL
VAKGFIEYIDTEEEETTMISMTISDLVQARLRPDEAYTENYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRASTMGMRHGSYDKLDDDGLAPPGTRVTGEDVIIGKTTPISQDEAEGQSSRYTRRDHSI
SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
PWTVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
HKCGYQMRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEVCGLIAIANLKKNSF
ECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKHLKSAKGRQ
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggagtacaacgaatacgaacctgaacctcaatacgtagaagacgatgacgatgaggag
attacccaggaggacgcgtgggctgtgatatctgcttatttcgaagagaaaggtctcgtt
cgtcagcagcttgattcgtttgatgagtttattcagaatactatgcaagaaatcgttgat
gagtctgctgatatcgagatccgacctgaatctcagcacaatcctggccatcagtccgat
tttgcggagacaatctacaaaattagctttggacagatttatctgagtaaaccgatgatg
acagagtctgatggagagactgctaccctgtttcccaaggccgcgaggttgagaaacctc
acatattctgctcctttgtatgtcgatgttacaaaaagagttataaagaaagggcatgat
ggtgaggaagtcacagagacacaggattttactaaagttttcattgggaaggttcctatc
atgcttcggtctagctattgtaccttgtttcagaactcggagaaagatctgacagagctt
ggagaatgtccttatgatcagggtggatactttattattaatggcagtgaaaaggttctg
attgctcaggagaagatgagtacgaaccatgtttatgtgttcaagaagagacagccaaat
aagtacgcttatgttggtgaagtccgttctatggctgagaaccaaaataggcctccaagc
acaatgtttgtgcgtatgcttgctcgtgctagtgccaaagggggttcatctggacaatat
attcgatgtactcttccatacatcagaacagaaattcctattatcatagtctttcgtgcg
ctgggatttgttgccgataaggacattttggaacacatctgctatgattttgccgacacg
cagatgatggagttactcaggccttccttggaagaagcttttgtgattcaaaatcagcag
gttgcacttgactatattgggaaacgtggtgcaactgttggtgtaaccaaggaaaaaagg
ataaagtatgcgaaagatatccttcagaaagaaatgcttcctcatgtaggagttggggaa
cattgtgagacaaaaaaagcttactattttgggtatatcgtacatcggttgctgctttgt
gcacttggccgaaggccagaagatgatagagatcattatggtaacaagaggctggatctt
gctggtcctttactaggagggctctttagaatgcttttccgaaagctaacaagggatgtg
agatcttatgttcaaaagtgtgttgacaatggcaaagaagtcaatcttcaatttgccatt
aaggctaaaactattacctctggcctgaaatattctcttgctactgggaactggggccag
gcaaacgctgctggcactagagctggagtttctcaggttcttaatcggttgacgtatgct
tcaactttgtcacatctgaggcgtctcaattctccaataggacgtgaagggaaattggca
aaaccaagacaactgcacaattcacagtggggaatgatgtgccctgctgaaacacctgaa
ggacaggcttgtggtctagtgaaaaacttggctctcatggtctatataacggttgggtca
gctgcttatcctatattggaatttttggaagaatggggtactgagaattttgaggaaata
tctccatctgttatacccacagccacaaaaatctttgtgaatggaatgtgggttggtgtt
cacagagatcctgacatgttggtgaaaacgttgagacgtttgagaagaagggttgatgtc
aacactgaagttggagtagttagagatatacgtctgaaggagctccggatatacactgat
tatggccgttgtagtcgtccgttgtttattgtggataatcagaggctcttaataaagaag
agagatatctatgctctgcaacaaagggaaagtgcagaagaagatggttggcatcatctg
gttgctaagggctttatagaatacatagacacagaggaagaggagacgaccatgatttcc
atgactatcagtgatctggttcaagctagactccgcccagacgaggcgtataccgaaaac
tacacacattgtgagattcacccatctctgatattgggtgtctgtgcttcaattatacca
tttcctgaccataatcagtcacctcgtaatacatatcaatctgccatggggaagcaagca
atgggaatttatgtcaccaactaccaatttcgcatggataccttagcctatgttctctat
taccctcaaaagcctctggttaccaccagagctatggagcatcttcactttaggcaactt
ccggcaggaattaatgctattgttgccatttcttgctattctggatataatcaagaagat
tctgtcatcatgaatcagtcttcaatagatcgtggtttcttccgatccctgttctttcgg
tcttacagagatgaggagaaaaaaatggggacgcttgtcaaagaagactttgggcgccca
gacagagcaagtacaatgggtatgcgacatggttcttatgataaactggatgatgatggt
cttgcacctcctggtactagagttacaggtgaagatgttatcattggaaaaaccactcca
atatctcaggatgaggctgaaggacaatcatcacgatacactagacgtgatcatagtata
agcttgcgacatagtgaaactggaatggtggatcaggtgttattgactacaaatgcagat
ggtttgaggtttgtgaaagtgagggtcagatccgttcggattcctcaaattggagacaaa
tttagtagtagacacggtcagaagggaactgttggcatgacctacacgcaggaggacatg
ccttggacggttgaaggtgtcactccggatattattgtgaatccacatgctattccgtct
cgaatgacaattggacagctaattgagtgcatcatgggaaaagtggcagctcacatggga
aaagaaggagatgcaactccttttacagatgtcacggtggataatataagcaaagctctt
cataagtgtgggtaccaaatgcgtggatttgagagaatgtacaatggtcacacgggcaga
ccactcacagctatgatattccttggaccaacgtattaccaaaggttgaagcatatggtt
gatgacaagattcactcgcgtgggcgaggtcctgtgcaaatcttaacaagacaaccagct
gaagggcgatcccgtgatggtggtctccgttttggagagatggaacgcgattgcatgatt
gcacatggtgctgctcatttcttgaaagagaggctgtttgatcagagcgatgcgtatagg
gtacatgtgtgtgaagtctgtgggctcattgccattgcaaatctgaagaagaattcattt
gaatgcagaggctgcaagaacaaaacagatattgttcaggtttacattccttacgcatgc
aaattgctctttcaagagcttatgtcaatggccattgcaccacggatgcttactaaacac
ctcaaatcggctaaaggcagacagtga
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