Camelina sativa (false flax): 104722916
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Entry
104722916 CDS
T05044
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104722916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104722916
03036 Chromosome and associated proteins [BR:
csat03036
]
104722916
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104722916
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104722916
RSF complex
104722916
WICH complex
104722916
B-WICH complex
104722916
NORC complex
104722916
BRF complex
104722916
NuRF complex (fruit fly)
104722916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
DUF1509
Motif
Other DBs
NCBI-GeneID:
104722916
NCBI-ProteinID:
XP_010439511
LinkDB
All DBs
Position
1:2337190..2343058
Genome browser
AA seq
1057 aa
AA seq
DB search
MARISNSDEAFSSEEEEERVKENEEVEDEEELEAVARSSGSDDDEVAAADESPLSDGEAA
PMEDDYEDEEDEEKAEISKREKARLKEMQKLKKQKIQELLDSQNASIDADMNNKGKGRLK
YLLQQTELFAHFAKGDASSSQKKGKGRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLL
TQPSCIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING
PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRDDLLVAGKFDICVTSFEMA
IKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWAL
LNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKET
ILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPY
TTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGN
TGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR
AHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV
RYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFD
DENKDENKLDFKKIVSDNWNDPPKRERKRNYSESEYFKQTLRQGGPAKPKEPRIPRMPQL
HEFQFFNIQRLTELYEKEVRYLMQTHQKNQLKDTIDVEEPEEGGDPLTAEEVEEKEQLLE
EGFSTWSRRDFNTFLRACEKYGRNDIKSISSEMEGKTEEEVERYAKVFKERYKELNDYDR
IIKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMI
HKLGYGNWDELKAAFRTSPLFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQA
RKEKKLAKSATPSKRTVGRQASESPSSTKKRKHLSMR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaatttcgaattccgatgaggctttctcgtcggaggaggaagaggagcgggtt
aaggaaaacgaagaagtagaagacgaggaggagctcgaggctgttgctcgttcttctggc
tccgacgatgacgaagtagccgccgctgacgaatccccactctccgacggagaagccgcc
cctatggaagatgattacgaggacgaagaagatgaagaaaaagctgaaatcagcaaacgt
gagaaagccagacttaaggagatgcagaagttgaagaagcagaagattcaggagctgctg
gactcacaaaatgcttccattgatgctgatatgaacaataagggaaaagggagactgaag
tatcttctgcagcagactgagttatttgcacactttgctaaaggtgatgcatcttcttct
cagaaaaaggggaaaggaaggggtcgtcatgcttccaagataactgaagaagaggaagat
gaagagtatctaaaggaagaagaggatggcttaactggatctggaaacacacggttgctc
acacagccctcttgtattcaagggaagttaagagattaccaactagctggtttaaactgg
ctcattcggctgtatgagaatggcattaatggaattcttgctgatgaaatgggtctgggg
aagacgcttcagacgatttctttgttggcataccttcatgaatacaggggaatcaatggc
cctcatatggtggttgctccaaaatcaacccttggtaattggatgaacgaaattcgtcgg
ttttgtcctgtcctacgcgctgtgaaattccttggtaatcctgaggagaggagacatatt
cgagacgacctgttagttgctgggaaatttgatatttgcgtcacaagctttgagatggcc
atcaaagaaaagacagcacttcgtcgttttagctggcgttatattatcatcgatgaagcg
catcgaatcaagaatgagaattcacttctttctaaaaccatgagactttttagcaccaat
tatcgacttcttatcacgggaaccccacttcagaataatcttcatgaactgtgggctctt
ctcaattttcttctgcctgaggtttttagttcagcagagacttttgatgaatggtttcaa
atttctggtgagaatgatcagcaagaagttgttcaacaacttcacaaggttcttcgacca
tttcttcttcgaagactgaaatcagatgttgagaaaggcttaccaccaaagaaggagacg
atacttaaagttggcatgtctcagatgcaaaaacaatactacaaggctttattgcagaag
gatcttgaagcagtcaatgctggtggagaacgcaaacgtttgctaaacattgctatgcaa
cttcgtaaatgctgcaatcacccttatctcttccagggtgcggagcctggtcccccttat
accacaggagatcaccttataacaaatgctggtaagatggttctcttggataaattgctt
cctaagctgaaggaacgtgattcgagggttctgatattttctcagatgacaaggcttttg
gatattcttgaggattatttaatgtatcgcggttatctctattgccgtattgatggaaat
actggtggtgatgaacgagatgcctccatagaagcctacaacaagccaggaagtgagaaa
tttgttttcctgttatcgactagagccggagggcttggtatcaatcttgctactgcagat
gttgtgatcctttatgatagtgactggaacccgcaagttgacttgcaagctcaggatcgt
gcccataggattggtcaaaagaaagaagttcaagtgtttcgattctgcactgagtctgct
attgaggagaaagtgattgagagagcttacaagaagttggcgcttgatgccctggtaatt
caacaagggcgattggcagagcagaaaactgttaataaggatgagttgcttcaaatggta
agatatggtgctgagatggtgttcagttctaaagatagcacaatcacagacgaggatatt
gatagaatcattgccaaaggagaggaggcaacagctgaacttgatgccaagatgaagaaa
tttacagaagatgcaatacagtttaaaatggatgacagtgctgacttctatgattttgat
gatgaaaataaggatgagaacaagcttgattttaagaaaattgtgagcgacaattggaat
gatccaccaaagcgggagagaaagcgcaactactctgaatctgaatactttaagcaaaca
ttgcggcaaggtggtccagctaaacctaaagagcctagaattccgcgcatgccccagttg
cacgagttccagttctttaacatccagagattgaccgagttgtatgaaaaggaagtacgt
tatctcatgcaaacacatcagaaaaatcagttgaaagacacaattgatgttgaagaacca
gaagaaggtggtgatcccttaactgctgaagaagtagaagaaaaggagcaattattggag
gagggtttctccacatggagtagaagagacttcaatactttccttagggcttgtgagaag
tatggccgcaatgacataaaaagcatttcctctgagatggaaggaaaaacagaggaagag
gttgaaagatatgccaaagtattcaaagagcgatacaaggagctaaacgactatgataga
atcattaagaacattgagaggggagaggcaagaatctctaggaaagatgaaatcatgaaa
gccataggaaagaaactggatcgctacagaaacccttggctggaactgaagatacaatat
ggtcagaacaaagggaagctgtacaatgaagagtgtgaccgtttcatgatctgcatgatc
cacaaacttggttatgggaattgggatgagcttaaggcagcattcaggacatcgcctttg
ttcaggtttgactggtttgtgaaatcccgcacgagtcaggaacttgcaagaagatgcgac
actctgattcggctgattgagaaagaaaaccaagagtttgatgaaagagagaggcaggcc
cgtaaagaaaagaagctcgcaaagagtgcaacaccatcaaagcgaaccgtaggaagacaa
gcaagtgagagtccttcatccacgaagaagcgaaagcacctgtcgatgagatga
DBGET
integrated database retrieval system
