Camelina sativa (false flax): 104723330
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Entry
104723330 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104723330 isoform X2
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104723330
03036 Chromosome and associated proteins [BR:
csat03036
]
104723330
Enzymes [BR:
csat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
104723330
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104723330
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104723330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
DUF5917
Motif
Other DBs
NCBI-GeneID:
104723330
NCBI-ProteinID:
XP_010439980
LinkDB
All DBs
Position
11:14437427..14449038
Genome browser
AA seq
1819 aa
AA seq
DB search
MGSSVITSLSLSFKQVPPAAVPAFLDCVLSSTGESPSTLFESLINELPFRLEDTVNGEKR
FDSDDCNHIASLVAGLCHLLKNFGFGAADNHNALQLFVWRVFIPLMKMVRAYDLDMLNEI
VQSFFDVVIETSVLDILGVSLVPFLMRSAGVSMGMLQHEESDFIKWGELLLCDSLNTVNM
DENYIANLSGSFPIPLSCHLLNLILNAAFQSHQAAPEVESFAAGMLWDLCNTTERLLSQS
VEHRSCAVSFLLPAVFKAFSSQSSLKISRQGNMYILSRNGFKKRIWECCKKLFSVGPMER
RDAYSVLSLCLSTGSWTDETESFVSEKDPVEFDFRSEQEFWDEIKKGLVVDESLVRKQSL
HILKSVLSISEVSKTGSEKKPEADSVHRSLTRKETWAEKEAKSLGVGELYGSVDSGLSTQ
QEWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYDGSLKSDCNSHHGHMEIPDEE
TNILNWLEVLWNRGFRHDNPLVRCTVMESFLGIEWRRYKTCTQSMSQTFVLGPFIEGLND
PIHHKDFGLKGIYTSRTIEGAALYVCAYTSCLNPRNRVGFLINLASLAKKQSFGRAGFMA
LVQCIVSTSDVVGGYGDKEMWHLENKFSGTADEPSCEHLSQDDMTHILDVLKFVAESSRQ
HFNHKYRIRVYQKVLETASSAVNPCMVPLGTLLQFVSAIPREFTDHDGSLRKMMLEWLQG
SNRKTSNSLCSDGNRLLASLYEYLKGFISDHGESFDDDDLEAWDSQTKRWARVFFLIINN
EEHLTDIIMFVQNSGHDFFQEKNHLERGPTKFLIFILSMLLELQNMQDGISELSSSVKSK
LCIASVEKTGKQIVDDASIIKKKFAVVLLSILKELIPFAESSCSIFWSHTTVENAVLSGS
VIGKLGGPSQRRLSGPSTTAVLEAVTLVKTIGWISSYCAQVTSGVELKLALAFFWKFTQH
TISSQICNSEAAAEVNLAAFEALAAVLNAFVSLCSAGAFNLLENDNTLLSMVDGEFWLQV
SVPAFLHNINHLLTAGLLVRSRRAVLLSWKWLCVESLLSVMHILDARRIPGDRTSFFSDD
TVKSIFQDIVESLENAGEGSALPMLKSVRLALGILASENSSLDGFLGVDTQTMWQLVKSC
WILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHIAEDGHGPLKWFVEKVLEEGQKSPRT
IRLAALHLTGLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLLAK
SPDPELTELFINTELYARVSVAGLFQKLANLAYVVEPESQNQDCQDALVAGKLFLLELLD
AAVHDKDLSKELYKKYSAIHRRKIRAWQMICIMSRFVSNDIVLQVMDSVHICLHRNNLPA
VRQYLETFAINIYLKFPALVKEQLVPILQNYDSKAQQALSSYVFVAANIILHAEKTAQQT
HLRELLPPIIPLLTSHHHSLRGFAQLLVHRVLFRLFPPVESASSQTISLEKLSFENLKSY
LDKNPDCSRLRASMEGFLDAYDPSTSATPAGVFVNRVEDSEFECVPTCLMDNVLSFLNDV
REDLRAFMAKDVVTIKNKGFKMNEEPNRRLIMSNTDEQKLSEPSSLDFQKKITLSKHEKQ
DASSTSVLRNGETYKRLFEMEKEDELVSQLLRSRSMEVERLKSDRQSLILVASLVDRIPN
LAGLARTCEVFKASGLVVADANIIHDKQFQLISVTAEKWVPIMEVPVNSLKLFLEKKKRE
GFSILGLEQTANSISLDKHQFPKKTVLVLGREKEGIPVDIIHILDACIEIPQLGVVRSLN
VHVSGAIALWEYTRQQRIQ
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgggttcctctgtgataacttcactgtccttgagcttcaaacaagttccaccagcagca
gttcctgcgtttcttgactgtgttctaagctcaacaggcgaatctccctcgacccttttc
gaatcacttatcaatgagttgccttttcgtttagaggatacggttaatggggagaagagg
tttgattctgatgattgcaaccacattgcttcattggtggctgggctttgtcatctactt
aagaattttggttttggtgctgcggataatcataatgcgttgcagttgtttgtgtggaga
gtgtttattccactcatgaagatggttcgtgcatatgatttggatatgcttaatgagatt
gtacaatcgttctttgatgtagtgattgagactagtgtattggatatattgggagtgagc
ttggtgccttttttaatgagatcagctggtgtttcgatgggaatgcttcaacacgaagaa
tcagatttcatcaagtggggcgagctgttgctttgtgattctttgaatacagtaaatatg
gatgaaaactacattgcaaatttgtctggatcatttccgattccactgtcttgccatctt
ctgaatttgatactgaatgctgcttttcaaagtcaccaagcagctccagaggttgaaagt
tttgcagccggtatgctatgggatttgtgtaatacgactgagcgtcttttgtcacaaagt
gtagaacatcgttcgtgtgctgttagtttcctcctccctgctgttttcaaggcattctct
tctcagtcctctttgaagatctcacgccaaggaaatatgtacatactttcaaggaatgga
tttaaaaaaagaatttgggaatgctgcaagaagctgttctcggttgggccaatggagaga
agggatgcttacagtgtcctctctttgtgtctttctactggctcttggacagatgaaact
gaaagtttcgtttcagaaaaagaccctgttgaatttgactttagatccgaacaagagttt
tgggatgaaatcaagaaaggcttggttgttgatgagagcttagtaaggaagcagtcattg
catatactaaaatcggttttatctataagtgaagtgagtaagaccggttctgagaagaag
cctgaagcggattcagttcatcggtccctgacaagaaaggagacgtgggcagaaaaggaa
gccaagtcgcttggtgtgggagaattgtatgggtctgttgactctgggttgtccactcag
caggagtggcaagcttttctgctcctgtatgagatgcttgaagagtacggcactcacctt
gtagaggcagcatggagtaaccagattgatttattaatcaagtcatctctcagatatgat
ggatccttgaaatccgactgtaactctcatcatggtcacatggaaattccagatgaagaa
actaacattttgaattggttagaggttctttggaataggggctttcgtcatgataaccct
ctagtcaggtgcacggtcatggagtcttttctaggtatcgagtggagaagatataaaaca
tgtacacaatcaatgtcccaaactttcgtacttgggcctttcatagagggtttgaatgat
cctatacaccacaaggattttgggctgaaaggaatctatacctcaagaacaattgaaggt
gcagctctatatgtgtgtgcgtacacaagttgcctcaacccaaggaatcgagttggattt
ttgatcaacttggcatctcttgcgaagaaacagtcttttggtagagctggatttatggct
ctcgtacaatgcattgtttctacgtcagatgtggttggaggatatggggacaaggaaatg
tggcatctcgaaaataaattctctgggactgccgatgaaccttcttgtgaacatttaagt
caagatgatatgacacatatactggatgtcttgaagtttgttgcagagagcagcagacag
cattttaatcataaataccgtatccgagtttatcaaaaagtgttagaaactgcttcctct
gcggtgaacccttgtatggttcctctcggaacactattgcagtttgtttcagcaattcct
cgggagttcactgaccatgatggttcattgcggaaaatgatgctagaatggcttcagggg
agcaacagaaagacttccaacagtttatgtagtgatggcaatcgtcttctggcgagcctt
tatgagtatctgaaaggatttatcagtgatcatggtgagagttttgatgatgatgacttg
gaggcatgggattcccaaacaaaacgatgggcaagagtatttttcctcataattaataat
gaagaacatctcaccgatatcataatgtttgtgcaaaatagcggccatgattttttccaa
gagaagaatcatttagaacgaggacctacgaagtttttaatatttattctgagtatgctt
ttggagctccagaacatgcaagatggaatttctgagcttagttcttcggttaaaagcaag
ttgtgcattgcttctgttgagaaaaccggcaaacagattgttgatgatgcttcaattata
aagaaaaagtttgctgttgttctcttatcgattctgaaggagctgattccatttgctgag
tcatcttgttcaatattttggtctcacactactgtggagaatgccgttctgtctggttct
gttataggaaaactagggggtccaagtcaacgccggctatctggtccttctacaacagct
gtactagaagctgtaacgttggtgaaaactattgggtggatctcgtcatactgtgcccaa
gtcactagtggtgttgaactcaaattagcattggctttcttttggaagttcacccagcat
accatatcatctcaaatttgtaattctgaggctgcagctgaggtcaatcttgcagcgttt
gaggcgctagctgcagtattgaatgcatttgtgtccttgtgctcagctggagctttcaac
ctattagaaaacgataatacattgttatccatggtagatggtgaattttggttacaagtt
tcggttccagctttcctccataacattaatcatcttctcacagcaggacttctagtaaga
agtaggagggcagttctgctaagctggaagtggctttgtgtggagtctctgctatcagtc
atgcatattcttgatgccagacgtattccaggggatagaacgtcgttcttctcagatgat
acggttaaaagcatttttcaggatattgtagagagccttgaaaatgcaggggagggttcc
gctttgcctatgctgaaatctgtcagactcgcgttggggatacttgcgtctgagaactca
tctttggatggtttcttgggtgtggatactcagacgatgtggcagttggtcaaatcatgt
tggatattgcatatcagctgcaagaaaaggagggttgcacctattgctgcgcttttgtct
tctgtgttgcattcttctttgtttagtaataaagacatgcacatagctgaagatggacat
ggtccgctgaagtggttcgttgaaaaagtactcgaggaaggtcagaaaagcccacgcaca
attcgccttgcggccttgcacctgacaggactctggctcatgtacccaaggacgataaag
tactatattaaagaattgaggctcctgactctctatggttctgttgcatttgatgaagat
tttgaagctgaattatctgacaataatgatgcaagaactgaagtatcattattggcaaaa
agtccagaccctgaactgacagaacttttcatcaacacggagttatatgcacgtgtctct
gttgctggtctgtttcagaagctggctaatttggcctatgtagttgaaccagaaagtcaa
aatcaagactgtcaagatgctctcgtggctggaaaattgtttctgctggagcttcttgat
gcagcggtgcatgataaagacttgtcaaaggagctttacaagaagtatagtgcaatccat
agacggaaaatacgtgcttggcagatgatatgcattatgtcgcgatttgtcagcaatgac
attgttctccaagttatggacagtgtgcacatatgcttacatagaaataacctgcctgct
gttcgacaatacctggaaacatttgccatcaacatatacctgaaatttccagcattggtt
aaagagcagttagttccaatattacaaaattatgactctaaagctcagcaagctctctcg
tcctatgtctttgtagcagccaatatcatcctccatgccgaaaagacagctcaacagaca
cacctgagagagcttcttcccccaataataccgttattaacttctcatcatcatagctta
cgtggtttcgctcagttattagtgcatcgagtactctttagactatttccccctgtggag
tcggcatcctctcaaacaatatccctggagaaactttcttttgagaatttgaagtcttac
ctggacaagaatcctgattgttcgagattgcgagcatcaatggaaggatttcttgatgct
tatgatcccagcacatctgctactccggctggtgttttcgtcaatcgtgttgaggatagt
gagtttgaatgtgttccaacatgcctcatggacaacgtgctctcttttctgaatgatgta
agggaagatctccgtgctttcatggcaaaggatgtagttaccattaagaataaaggcttc
aagatgaatgaagagcccaaccgtcggttgatcatgtccaatacagatgaacaaaagctt
tctgagccatcttcgttggacttccagaagaagatcactctttccaaacatgagaagcaa
gatgctagctcaacttctgtgctccgaaatggggaaacttacaagcggctctttgaaatg
gagaaagaagatgagctcgttagtcagctcttacgatctagaagtatggaggtcgaaagg
ttgaaatctgatcgacagagtttgatccttgtggcttcattggttgatcgtattcctaat
cttgctggattagcgcggacatgtgaggtgtttaaagcgtcaggtctagttgttgcagat
gcaaacataatacatgacaaacagttccaactaatcagtgtgactgctgagaaatgggtt
ccaatcatggaagtcccagtgaacagtttgaaactcttcttggagaagaagaagcgggaa
gggttctcaatattgggactggaacagacagcaaacagcatttcactagacaaacaccaa
ttcccaaagaagacggttttggtgctgggtcgtgaaaaggaaggcatccctgtggatata
atccatatactagacgcttgtatcgagatcccacaacttggagttgttaggtccctcaat
gttcatgtcagcggcgccatcgccctctgggaatacactcggcaacaacgcattcaatag
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integrated database retrieval system
