Camelina sativa (false flax): 104723338
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Entry
104723338 CDS
T05044
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104723338
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104723338
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GRP
Radical_SAM_N
Motif
Other DBs
NCBI-GeneID:
104723338
NCBI-ProteinID:
XP_010439990
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Position
11:complement(14474171..14476531)
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AA seq
390 aa
AA seq
DB search
MATLNPFDLLDDDSEDPSQIVAAKPLKVEKSAPVQPAKSGKFPTKPAPPTQAVREAKNAP
AGGRGGGRGGGNGRGRGGGYNRDSRNTDAPANENGYGGGYNRRSEEGDGARRGGSVGGYR
GDRGARGARRGGFNNGESGDFERPRRNFERHSGTGHGSEFKRDGAGRGNWGTTEDDIAPV
TDESTAAVEKNVTVEKQSGEGEATIANKETPAEEQPEKEPENKEMTLEEYEKVLEEKKKA
LQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKRVTEREEKTKKSLSINEF
LKPANGERYYPRGGYRGGRGGRGQRDGNQKNGEAAGPGNEGGRGQRGGGNQNYRAPANEG
GRGQRGGNPRYREPAAPAIEDTAQFPTLGK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttgaacccttttgatctcttggacgatgactcagaagatcctagccaaatc
gttgcggctaagccattgaaggttgagaaatctgctcccgttcagcctgctaagtctggc
aagtttcccaccaagcctgctcctcctactcaagctgtgagggaggccaagaacgctcct
gctggaggtcgtggaggtggacgaggaggtggtaacggtcgaggcagaggtggtggatac
aacagggattccaggaacactgatgctcctgccaatgaaaacggctatggtggaggctac
aacaggcgctcagaagaaggagatggagcaagacgtggtgggtctgttggtggataccgt
ggtgatcgtggtgctcgtggtgctcgtcgtggaggcttcaacaatggtgaatcaggtgac
tttgaacgcccacgtaggaactttgagcgtcacagtggaactggtcacggaagtgagttt
aaacgtgatggtgctggccgtggcaactggggaaccactgaagatgatattgctccggtg
actgacgaatccacagctgcggtggagaagaatgtgactgttgagaagcaaagtggtgaa
ggtgaagcaactattgcgaacaaagagacacctgctgaagagcaaccagagaaggagcct
gagaacaaggagatgactttggaagagtatgagaaggttttggaggagaagaagaaagct
ctgcaagcgaccaaggttgaggagaggaaggttgacacaaaagcttttgaggccatgcaa
cagctctcaagcaaaaagagcaacaacgatgaagtcttcatcaagctgggaacagagaag
gacaagcgtgttactgagagagaagagaagaccaagaagtctttgagcataaatgagttt
ctgaaacctgcaaatggagaaaggtactacccaagaggtggttaccgtggtggaagggga
ggacgtgggcaacgagatggaaaccagaagaacggagaagctgctggcccaggcaatgag
ggaggacgtggacaaagaggaggaggaaaccagaattacagagccccagccaatgaggga
ggacgtggacaaagaggaggaaacccgagatacagggaacctgctgcaccggccattgag
gacactgcacagttccctactttgggtaagtaa
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