Camelina sativa (false flax): 104723363
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Entry
104723363 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104723363
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104723363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
DNA_primase_S
Motif
Other DBs
NCBI-GeneID:
104723363
NCBI-ProteinID:
XP_010440014
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Position
11:complement(14641147..14648334)
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AA seq
792 aa
AA seq
DB search
MEDDGGERSSFVAGIIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPT
VVIVPPNKLAADGMVGVSELVDRCYSTVRKVVLARGCFDDTKGAVLIQNLAAEEPLALGL
DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFDHMNIDATSVENLEIIDP
FHNALLGTSNKKRSLFQMLKTTKTVGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVLGFDNTRKSQNMISSIILLKTALDAL
PLLAKVLKDAKCFLLTNVYKSVCENDKYASIRKKIGEVIDDDVLHARVPFVARTQQCFAL
KAGIDGFLDIARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRKGFFVRIPQKEVQGK
LPSKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCLEALMDTIREDISALTL
LAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTESGPLAIDAGRHPILESIHNDFVSNSI
FMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMD
NLESNSSTFMTEMRETAFIMQNVSNRSLIVMDELGRATSSSDGLAMAWSCCEYLLSLKAY
TVFATHMDSLAELATIYPNVKVLHFYVDIRDNRLDFKFQLRDGTLHVPHYGLLLAEVAGL
PNTVIETARTITSRITDKENKRIELNCVKHHEIHRIYRVAQRLICLKYSSQTEDSIRQTL
QNLRDSFIEQRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgggggagagagatcgagcttcgtcgccggcatcattgagaacagagcc
aaagaggtcgggatggctgcttttgacctaagatcggcttcactgcatctatctcagtat
atagagacgagcagctcataccaaaacacgaagacgctgttgcgtttctatgatccaact
gtggtaatcgttcctcccaacaaattggcagctgatggcatggttggtgtatcagaactg
gtggatcgatgttatagcactgttaggaaggttgttcttgcccgtggctgttttgatgat
actaagggtgctgtattaatacaaaacttggctgcagaagaacctttggcccttggttta
gacacttactataagcagcattatctctcactggctgctgctgcagctacgatcaaatgg
atagaggcggaaaagggtgtgattgtcaccaaccactcactgactgtaacttttaatgga
tcgtttgatcacatgaacatcgatgcaactagtgttgagaatctggaaatcattgatcca
ttccataacgcacttttgggcactagcaacaaaaagaggagtctgttccaaatgctcaag
acaacaaaaacagttggcgggactaggcttcttcgtgccaatttgttgcagcctctgaaa
gatattgaaactattaacactcgcctggattgcctggatgagttgatgagcaatgaacaa
ctattctttgggctctcacaggttttacgtaaatttcctaaagagactgatcgagttctt
tgtcatttctgcttcaagccaaagaaagtcacagaagcggtcctaggttttgataatacc
agaaagagccaaaatatgatttcaagcatcatcttacttaagactgcattggatgctttg
cctctacttgctaaggttttaaaggacgcaaagtgttttctccttaccaatgtttataag
tctgtgtgtgaaaatgataaatatgcttccatcagaaaaaaaattggggaagttattgat
gatgatgttctccatgcacgggttccttttgttgcccgcacacagcagtgttttgcttta
aaagccggaattgatggatttttggatattgcaaggagaaccttttgtgatactagtgaa
gcaatacataatctggccagtaagtatcgtgaggaattcaacttgccaaatctaaaactc
cctttcaacaacaggaaaggcttctttgtcagaattcctcagaaggaagttcagggaaaa
cttccaagcaaattcactcaggttgtaaaacatgggaaaaatatacattgttcgagtctg
gaactggcttctttgaatgtcaggaataagtctgccgctggagagtgtttcattcgaacg
gaaacatgcttggaagcactgatggatacgataagggaagatatctctgcccttacactc
ctagcagaagtcttatgtctcctagacatgattgttaattcatttgctcatacaatatcc
acaaagccagtggatcgatactctagacctgaactaacagaaagtggcccactggcaatt
gatgctggaaggcatcccatcctagaaagcatacacaacgactttgtttctaatagtatc
ttcatgtcagaagcaaccaacatgttggtagttatgggtccaaacatgagcggaaagagc
acatatctccaacaggtgtgtctagtagtcattctcgctcagattggctgctacgtccca
gctcgctttgcaactataagggtggttgaccgcatatttacaagaatggggacaatggat
aaccttgagtcgaactcaagcacgtttatgacagagatgagagagaccgctttcataatg
cagaatgtctccaacaggagtttgatagtcatggatgaacttgggagggcgacttcttcc
tcagacgggttagcaatggcatggagctgctgcgagtatctcttatcactgaaagcgtac
acagtatttgcaacccacatggatagtcttgctgagttagcaaccatctatccaaatgtc
aaggttcttcacttttatgtagacatcagagacaaccgcttagacttcaagtttcaattg
cgagatggaaccctacatgttccacactatggccttctattagccgaagtggctggtctg
cctaatacagtgattgaaacagctaggaccataacctcaagaatcacagacaaggaaaat
aaaagaatagagctaaattgtgtgaagcaccacgaaatacataggatctaccgagttgct
caaaggttgatatgcttgaaatactcttcacagacagaagactcaattcgtcaaactctc
caaaatctaagggacagtttcatcgaacaaaggctctaa
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