KEGG   Camelina sativa (false flax): 104723674
Entry
104723674         CDS       T05044                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104723674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104723674
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104723674
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     104723674
SSDB
Other DBs
NCBI-GeneID: 104723674
NCBI-ProteinID: XP_010440363
UniProt: A0ABM0UFF0
LinkDB
Position
11
AA seq 795 aa
MERSDSKDFYNFARTTSSDNKSALFDASQYEFFGQSLEEVELGGLDEDASVRGHVDDEEY
HLFDKREGTGLGSFSEMDDLATTFAKLNRNVTGPKHLGVIGDRGSGSFSRESSTATDWTQ
DNEFTSWLDQHTLEEQAQEASWPSQPQSSANSNSLYRTSSYPQKQTQLQHYSSEPIIVPE
SAFTSFPSPGKRSQQSSPSHIHRAPSLPGGSQSNFSAPNASPLSNTTYHLSGLSHGQPHY
GSNLARYASCGPTLGNMAQPPHWVTDPGLLHGDHSGLLHSLVQQQHLQQLPPRNGFTSQQ
LISLQQRQSLAHLAALQSQLYNSYPSPSQKAPFGVGEVREHKHKSSHRSRKNRGISQQNS
DLASQKSESGLQFRSKYMTSEEIESILKMQHSNSHSSDPYVNDYYHQARLAKKSAGSRTK
PPQLYPSHLKDHQSRSRNSSSDQQPQVHVDALGKITLPFISRPRALLEVDSPPSSGDGRS
GHKGSEKHLEDEPLVAARVTIEDAFGVLIDIVDIDRTLQFNRPQDGGAQLKRKRQILLEG
LATSLQLVDPFSKTGQKTGLTAKDDIVFLRITTLPKGRKLLTKYLQLLVPGTEIARVVCM
AVFRHLRFLFGGLPSDSLAAETIANLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRP
IGSPSGDGASVVLVSLLERAAEVVVVVAAVPRVSNNSNDGLWRASFDEFFSLLTKYCRSK
YETIHGQNHDNAADVLELAIKREMPAELLRASLRHTNEDQRNFLLNFGRRASPVNESTTT
TRASGGQVKSEFVRG
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggagagatctgattctaaagatttctataacttcgctcggacgacttcttcagataat
aaaagtgctctttttgacgcatctcaatatgagttctttggtcaaagtcttgaagaagtt
gaattgggtggtcttgatgaagatgcttctgttcgtggacatgtcgatgatgaagagtat
cacttgtttgataaaagagagggtactggtttaggatctttttctgagatggatgatctt
gccacaacttttgcaaagctgaatagaaatgttactgggcccaaacaccttggagtaatt
ggtgacagaggatcagggtccttttcaagggaaagttccactgctacagattggacacag
gataatgagttcacaagctggttggaccaacacacgcttgaagaacaagctcaggaagct
agttggccttcacagccacaatcatctgccaattcaaattctctatacaggacatcctca
tatcctcagaagcaaacacagctacaacattacagtagcgaaccgattattgtaccagaa
tcggcgtttacatcttttccttcgcctggcaaaagatcacaacagtcttcaccgagccat
attcatcgtgctccttctcttcctggtggtagtcagtcgaacttttctgctccaaatgca
tctcctctgtcaaacacgacttaccacctttcaggattgtcacatggacagccgcattac
ggtagtaatttggctagatatgcctcatgtggtcctactcttggtaacatggcgcaacct
cctcactgggtgactgaccctggccttctgcacggtgaccattcggggttgttacacagt
ctggtacaacagcagcatttgcaacagttgcctcctcggaatggtttcacttctcaacag
ttgatatcacttcagcagagacaatctctagctcatcttgctgcattgcaatcacaactg
tataattcctatccttcaccatcacaaaaagctccttttggtgttggtgaagtaagggaa
cacaaacataagtcatctcacagaagtcggaagaacagaggcatctcccaacagaactcg
gatttggccagccagaaaagtgaaagtggattgcagtttagatcaaagtacatgacttca
gaagagatagagagtattctcaagatgcagcattccaactcacacagtagtgacccttat
gtcaatgactattaccaccaagctaggcttgccaaaaagtcagccggatcaagaacaaag
cctcctcagttgtatccttctcatttgaaggatcaccaatcccggtcccgtaatagtagt
tcagatcagcaaccacaagttcatgtggatgctcttggaaagattacacttccttttatt
tccaggccacgagccttactcgaggttgactctccgcctagctctggtgatggaaggtct
ggtcataagggatctgaaaagcatctggaagatgaacctcttgttgcagctagggtcact
attgaagatgcttttggagttcttatcgatatagttgacattgataggactctccaattc
aacaggccacaagatggaggagctcagctcaagagaaaacgacagatcctgcttgaagga
ttagcaacttcacttcaactcgttgatcccttcagcaaaacaggacagaaaacaggattg
accgccaaggatgatattgtctttctacgcataacgacacttcccaaaggtcggaaactg
ctcacgaagtatctacagcttcttgtacctggtactgagattgctcgtgttgtctgtatg
gctgtattccgccacctcagatttctcttcggtggtttaccgtcagatagccttgcagca
gagacaatagctaatcttgctaaagcagttacggtttgtgttcaagcaatggacctccga
gcactgagtgcttgtcttgcagctgttgtttgttcttcagaacagccacctctccgtccg
ataggaagcccttcaggtgatggagcatcggtagtgttggtatctcttcttgagagagct
gctgaagtagtagtagtagtggcggcagttccacgtgtcagcaacaactcgaatgatgga
ctctggagagcttcgtttgatgaattcttctctcttcttactaaatattgcaggagcaag
tatgagacaatccatggtcagaaccatgataatgcagctgatgtgttggagctagctata
aagagggagatgcctgctgagcttctacgtgcgagtctacgtcatactaatgaagaccag
aggaatttcttactaaactttggtcgtagagcatcgccagttaacgagtcaacaacaaca
acccgcgcaagtggtggtcaggtcaagtctgaatttgtgaggggttga

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