Camelina sativa (false flax): 104723674
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Entry
104723674 CDS
T05044
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104723674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104723674
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104723674
mRNA degradation factors
5'-3' decay
Decapping complex
104723674
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Other DBs
NCBI-GeneID:
104723674
NCBI-ProteinID:
XP_010440363
UniProt:
A0ABM0UFF0
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Position
11
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AA seq
795 aa
AA seq
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MERSDSKDFYNFARTTSSDNKSALFDASQYEFFGQSLEEVELGGLDEDASVRGHVDDEEY
HLFDKREGTGLGSFSEMDDLATTFAKLNRNVTGPKHLGVIGDRGSGSFSRESSTATDWTQ
DNEFTSWLDQHTLEEQAQEASWPSQPQSSANSNSLYRTSSYPQKQTQLQHYSSEPIIVPE
SAFTSFPSPGKRSQQSSPSHIHRAPSLPGGSQSNFSAPNASPLSNTTYHLSGLSHGQPHY
GSNLARYASCGPTLGNMAQPPHWVTDPGLLHGDHSGLLHSLVQQQHLQQLPPRNGFTSQQ
LISLQQRQSLAHLAALQSQLYNSYPSPSQKAPFGVGEVREHKHKSSHRSRKNRGISQQNS
DLASQKSESGLQFRSKYMTSEEIESILKMQHSNSHSSDPYVNDYYHQARLAKKSAGSRTK
PPQLYPSHLKDHQSRSRNSSSDQQPQVHVDALGKITLPFISRPRALLEVDSPPSSGDGRS
GHKGSEKHLEDEPLVAARVTIEDAFGVLIDIVDIDRTLQFNRPQDGGAQLKRKRQILLEG
LATSLQLVDPFSKTGQKTGLTAKDDIVFLRITTLPKGRKLLTKYLQLLVPGTEIARVVCM
AVFRHLRFLFGGLPSDSLAAETIANLAKAVTVCVQAMDLRALSACLAAVVCSSEQPPLRP
IGSPSGDGASVVLVSLLERAAEVVVVVAAVPRVSNNSNDGLWRASFDEFFSLLTKYCRSK
YETIHGQNHDNAADVLELAIKREMPAELLRASLRHTNEDQRNFLLNFGRRASPVNESTTT
TRASGGQVKSEFVRG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagagatctgattctaaagatttctataacttcgctcggacgacttcttcagataat
aaaagtgctctttttgacgcatctcaatatgagttctttggtcaaagtcttgaagaagtt
gaattgggtggtcttgatgaagatgcttctgttcgtggacatgtcgatgatgaagagtat
cacttgtttgataaaagagagggtactggtttaggatctttttctgagatggatgatctt
gccacaacttttgcaaagctgaatagaaatgttactgggcccaaacaccttggagtaatt
ggtgacagaggatcagggtccttttcaagggaaagttccactgctacagattggacacag
gataatgagttcacaagctggttggaccaacacacgcttgaagaacaagctcaggaagct
agttggccttcacagccacaatcatctgccaattcaaattctctatacaggacatcctca
tatcctcagaagcaaacacagctacaacattacagtagcgaaccgattattgtaccagaa
tcggcgtttacatcttttccttcgcctggcaaaagatcacaacagtcttcaccgagccat
attcatcgtgctccttctcttcctggtggtagtcagtcgaacttttctgctccaaatgca
tctcctctgtcaaacacgacttaccacctttcaggattgtcacatggacagccgcattac
ggtagtaatttggctagatatgcctcatgtggtcctactcttggtaacatggcgcaacct
cctcactgggtgactgaccctggccttctgcacggtgaccattcggggttgttacacagt
ctggtacaacagcagcatttgcaacagttgcctcctcggaatggtttcacttctcaacag
ttgatatcacttcagcagagacaatctctagctcatcttgctgcattgcaatcacaactg
tataattcctatccttcaccatcacaaaaagctccttttggtgttggtgaagtaagggaa
cacaaacataagtcatctcacagaagtcggaagaacagaggcatctcccaacagaactcg
gatttggccagccagaaaagtgaaagtggattgcagtttagatcaaagtacatgacttca
gaagagatagagagtattctcaagatgcagcattccaactcacacagtagtgacccttat
gtcaatgactattaccaccaagctaggcttgccaaaaagtcagccggatcaagaacaaag
cctcctcagttgtatccttctcatttgaaggatcaccaatcccggtcccgtaatagtagt
tcagatcagcaaccacaagttcatgtggatgctcttggaaagattacacttccttttatt
tccaggccacgagccttactcgaggttgactctccgcctagctctggtgatggaaggtct
ggtcataagggatctgaaaagcatctggaagatgaacctcttgttgcagctagggtcact
attgaagatgcttttggagttcttatcgatatagttgacattgataggactctccaattc
aacaggccacaagatggaggagctcagctcaagagaaaacgacagatcctgcttgaagga
ttagcaacttcacttcaactcgttgatcccttcagcaaaacaggacagaaaacaggattg
accgccaaggatgatattgtctttctacgcataacgacacttcccaaaggtcggaaactg
ctcacgaagtatctacagcttcttgtacctggtactgagattgctcgtgttgtctgtatg
gctgtattccgccacctcagatttctcttcggtggtttaccgtcagatagccttgcagca
gagacaatagctaatcttgctaaagcagttacggtttgtgttcaagcaatggacctccga
gcactgagtgcttgtcttgcagctgttgtttgttcttcagaacagccacctctccgtccg
ataggaagcccttcaggtgatggagcatcggtagtgttggtatctcttcttgagagagct
gctgaagtagtagtagtagtggcggcagttccacgtgtcagcaacaactcgaatgatgga
ctctggagagcttcgtttgatgaattcttctctcttcttactaaatattgcaggagcaag
tatgagacaatccatggtcagaaccatgataatgcagctgatgtgttggagctagctata
aagagggagatgcctgctgagcttctacgtgcgagtctacgtcatactaatgaagaccag
aggaatttcttactaaactttggtcgtagagcatcgccagttaacgagtcaacaacaaca
acccgcgcaagtggtggtcaggtcaagtctgaatttgtgaggggttga
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