Camelina sativa (false flax): 104723820
Help
Entry
104723820 CDS
T05044
Name
(RefSeq) probable pectate lyase 15 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104723820
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104723820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF2448
NosD
Motif
Other DBs
NCBI-GeneID:
104723820
NCBI-ProteinID:
XP_010440534
LinkDB
All DBs
Position
11:complement(19149601..19153782)
Genome browser
AA seq
466 aa
AA seq
DB search
MASSTQKVISVCFAVFVVLALTVTILRYDSRKLKTEELQSLSSSSTMAAIRKLKTEEFQS
SNSSTMAATMLGGEEEQQHAVAADPEKVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPI
DDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPTDEDVVNPKPGTLRHAVI
QEEPLWIVFKRDMVIELKQELIMNSFKTIDGRGANVHIANGACITIQFITNVIIHGLHIH
DCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAI
TVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNG
AYFRSSGEEASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtctactcagaaagtgatcagtgtttgcttcgccgtgttcgtcgtcttagct
ctaacggtgacgattctccggtacgattctaggaagctgaaaacagaggagttacagagc
ttaagcagcagctcaacaatggcggcgataaggaagctgaaaacagaggagtttcagagc
tcaaacagctcaacaatggcggcgacaatgcttggaggtgaagaagaacaacaacacgcg
gttgctgctgatccagagaaggttgctgatgaagtcgctaagcttgttcagatgagtgaa
cagaacaggacagcaaggaggaagctaggattcttctcctgtggaactggtaatccaatt
gatgactgctggcgttgtgaccctaactggcacaagaaccgtaaacgcctcgcggattgt
gggatcggttttggaaggaacgcaattggtggtcgtgatggacgcttctacgttgttact
gatccaactgatgaagacgttgttaatcccaaacctgggactctacgccatgctgtcatc
caggaggagcctctttggattgtgttcaagagggatatggttatagagctaaaacaggag
ctgatcatgaacagtttcaagaccattgatggccgtggcgccaacgtgcatatagccaac
ggtgcttgcatcaccatccagtttatcaccaatgtcatcattcatggtcttcacattcat
gattgcaagcctactggaaatgcaatggttagaagctccccatctcactttggttggagg
acgatggctgatggtgatgcagtctccattttcggatcgtctcacatctggattgatcat
aactccctctctcactgtgctgatggccttgttgatgctgtcatggggtctactgctatt
actgtttccaataaccactttacccaccacaatgaggtgatgttgcttggtcacagtgac
tcgtacacaaaagacaagctgatgcaagtgaccattgcttacaaccatttcggtgaagga
ctggttcagagaatgccaaggtgcaggcatgggtatttccatgtggttaacaacgactac
actcactgggagatgtacgccatcggtgggagtgcagaaccaaccatcaacagtcaagga
aacagatatgctgctcccatggaccgcttcgccaaggaggtgacgaaaagagtggagaca
gatgcaagtgagtggaagaagtggaattggaggtcggaaggagaccttctactgaatgga
gcatacttcaggtcatcaggagaagaagcgtctgctagctatggacgagcctcaagctta
gcagctaaaccatcatctatggtcgacactattacctccactgcaggagcactaggttgc
cgtaagggcagaccttgctag
DBGET
integrated database retrieval system
