Camelina sativa (false flax): 104724108
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Entry
104724108 CDS
T05044
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104724108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104724108
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104724108
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104724108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
S1
Motif
Other DBs
NCBI-GeneID:
104724108
NCBI-ProteinID:
XP_010440855
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All DBs
Position
11:23347263..23348897
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AA seq
298 aa
AA seq
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MGKLREVELLLNQTQKVRFERAMERLQSRTNNSVIVADSIPFNHDEAFLKGHGTSLVDGE
SLTTVCGVVNHVDKLVYVRTLRARYKAEVGDIVVGRVIEVAQSRWRVELNSTQDGLLTSM
NMPDAVQKRNTSVDELNMRNILVEDDVVCAQVGESQRDGSLQLLLARSHKYGKLHKGQLL
KVDPYLVRRSNLHFHFIESLGIDLILGRNGFIWVGEHAQSNDPMVVDNEIISSKTRQSIL
RIGNAIRVLSTLGFTLTPAVIMETFNLSHTENVQIHDMLGSEFHVLVTEREAERRTRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactaagggaggtagagctactattgaaccagacgcagaaggtcagatttgag
agagctatggagcggctacaatctcggacaaacaattctgtcatcgttgccgactccatc
cccttcaaccacgacgaagccttccttaagggacacggaacttccttggtcgacggtgag
tcgctgacgacggtctgtggagttgtgaatcacgtggacaagctcgtctatgtacgcacc
ttgcgagccaggtacaaggccgaggttggggatattgtggtaggccgtgttattgaggtt
gctcaaagccgttggagagtggagcttaactctactcaagatggactactgacttccatg
aacatgcctgatgctgttcagaagcgaaacacatctgtggatgaactcaatatgcggaat
attttggtagaagatgatgtagtttgtgcccaagtaggtgaatctcagcgtgatggcagc
ctccagctgctactcgctagaagtcacaagtatgggaagctccacaagggacagcttctc
aaggttgatccttacttggttaggagaagcaaccttcactttcatttcattgaaagtctt
gggatcgatttgattctcggccgtaatggcttcatttgggtcggggaacacgcccaatcc
aatgatcctatggttgtggataacgagatcatctcatcaaagactcgacaaagcattctc
agaatcggtaatgcgatacgggtcttgtctactctaggcttcactctcactccagcagtg
atcatggaaacttttaacttgagccacacggagaatgtccaaatacatgacatgcttgga
tcagagttccacgttctggtcacagagagggaagctgaaagaagaacacgtgcatag
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