Camelina sativa (false flax): 104724132
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Entry
104724132 CDS
T05044
Name
(RefSeq) THO complex subunit 4D isoform X1
KO
K12881
THO complex subunit 4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104724132
09122 Translation
03013 Nucleocytoplasmic transport
104724132
03015 mRNA surveillance pathway
104724132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104724132
03041 Spliceosome [BR:
csat03041
]
104724132
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104724132
TREX complex
104724132
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104724132
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104724132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
104724132
NCBI-ProteinID:
XP_010440882
LinkDB
All DBs
Position
11:complement(23758909..23761765)
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AA seq
299 aa
AA seq
DB search
MSGALNMTLDEIVKRGKTARSGGRGNSRGRGRGGGGGRGGGSNGFLGGGRGAGPARRGPL
AVNAHPSSFSINKPVRRVRSLPWQNGLFEDGLRAAGVSGVEAGTRLHVTNLDQGVTNEDI
RELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAIQALKKYNNVLLDGRPMRLEILG
GNKSDAPLPGRVNVNVTGLNGRLKRTVVIQQGGGRGRIRGGRGGRGPAPTVSRRLPIHNN
QQGGGMRGGRGGFRSRGGRGGGGRGRRGGKGNGKKPVEKSAADLDKDLESYHADAMNIS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagcattgaatatgactcttgatgagattgttaagaggggtaagactgcaagg
tctgggggaagagggaattcacgtggtcgtggtcgtggtggtggtggtggccgtggtggt
gggtcaaatggttttcttggcggtggaagaggagctggacctgctagaagaggtcctctt
gctgtgaatgctcacccatcatctttctccattaacaagcctgtccgtagggtcaggagc
ttgccatggcaaaacggtttgtttgaagatggcctaagagctgctggggtatcaggagtt
gaagctggaaccaggctccatgttacaaatctagaccagggtgtgacaaatgaagatata
agggaactcttctctgagattggggaggtagagcgttatgccattcattacgacaagaat
gggcgtccaagtggcacagctgaagtggtatatccaagaagaagtgatgcaattcaagct
ctgaagaagtacaacaatgtattattggatggaagaccaatgagacttgagattttgggt
ggcaacaagtctgatgctcctttaccaggtcgtgtgaatgtgaatgtcactggactcaac
ggaaggctgaagaggactgttgttatccaacaaggaggagggagaggaagaattagagga
gggagaggaggaagaggtccagctcctactgtcagtcgccgccttccaattcataataac
cagcaaggaggagggatgagaggaggaagaggcgggttccgtagtagaggagggcgtggt
ggtggtggccgtggtcgccgtggtggcaaaggaaacggaaagaagccagtagagaagtca
gctgctgatcttgacaaggatcttgagagctatcacgcagatgccatgaacatctcttaa
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