Camelina sativa (false flax): 104724154
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Entry
104724154 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104724154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104724154
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104724154
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104724154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
104724154
NCBI-ProteinID:
XP_010440900
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Position
11:complement(24086643..24089473)
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AA seq
412 aa
AA seq
DB search
MRKRVMDYQSQEMIATLNAENECMEIKEEVDEGTQGTVQSLTQPIQTIFDSNQNLKAEVW
KEFVSVGVGEDGKKRGCCIHCSRSYIIERLYGTSHLRRHLLHCSKRPESKRGGNDEQVRR
KHKSTDVKRALVPKSFRNREEVSNNVSTKRQRSLTSEGKTRSGMLLGLDILDCPICFHAL
TIPIFQCDNEHLACSSCCSKLRYKCPTCESPVGHKRCSVMESVLESVFVPCRNAKFGCTE
NVSYGKESTHEKDCSLSQCACPALDCNYTGSYSYIYAHFFDNHCHESNSLSFVCGGSVDV
EMNIATEKIVVLCESEKRLLFALQCFNELHGVYVTVRCIAPSTLELGKLAYYLYYSMDGH
TLTYTSPEVKMVLKVSFETPQDNFMFVPHSLLHGESLKIKVSIGLKVRVGSS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaagagtaatggattaccagtcacaggaaatgattgcaacacttaatgctgag
aatgaatgtatggaaataaaagaggaggttgacgaaggaactcaaggaacagtacaaagt
ctgactcaaccgattcaaacaatctttgattctaatcaaaacttaaaagctgaagtttgg
aaagagtttgtatcagtaggagtaggagaagatggcaaaaaaaggggttgttgcatccat
tgtagtaggagttatataatagaaaggctttatggaacatcacatttgaggcgtcattta
ctacattgctcaaagaggcctgaaagtaaaagaggaggcaatgatgaacaggtcagacgc
aaacataaatctactgacgtgaagagagccttagttcccaaatccttccgcaacagagaa
gaagtgagcaacaatgtctcgacaaagaggcaacgtagtttgacatcagagggcaagaca
cgctcggggatgctgcttggtctggatattcttgattgccccatttgcttccatgcattg
acgattcctatctttcagtgtgataatgagcatttggcttgctcctcttgctgttctaaa
ctgaggtacaagtgccctacatgtgagtcgcctgttggccacaaacgctgcagcgtaatg
gagagtgttctcgaatcagtctttgtcccttgccgaaacgctaagtttggatgcaccgaa
aatgtatcttatggtaaagaatcaactcatgaaaaggactgcagtctctctcaatgtgcc
tgccctgcattggactgcaattacaccggatcatacagttacatctacgctcactttttt
gataaccactgtcacgaatccaattctctgtcctttgtttgcggtggttcagttgatgtt
gagatgaacatagctacagagaaaattgtagtactttgtgaatctgagaagagactattg
ttcgcactgcagtgtttcaatgagttgcatggtgtgtatgtgactgttagatgcattgca
ccatctactctggaactagggaagcttgcatattatctctactactcaatggatgggcac
actcttacttatacgtcaccagaagtgaagatggttcttaaagtgagctttgaaacccct
caagacaatttcatgtttgtccctcactctttgttgcatggtgaatcgttgaagataaag
gttagcattggacttaaggttcgtgtgggctcatcatag
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