Camelina sativa (false flax): 104724206
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Entry
104724206 CDS
T05044
Name
(RefSeq) ubiquitin receptor RAD23d isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104724206
09124 Replication and repair
03420 Nucleotide excision repair
104724206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
csat03051
]
104724206
03400 DNA repair and recombination proteins [BR:
csat03400
]
104724206
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104724206
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104724206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Dsc3_N
UBA_Ucp12
TECR_N
UBA_3
Rad60-SLD_2
UBA_RAD5A
Ubiquitin_4
CUE
Ubiquitin_5
Crinkler
AAA_35
Pgp3_helical
Motif
Other DBs
NCBI-GeneID:
104724206
NCBI-ProteinID:
XP_010440953
UniProt:
A0ABM0UGU7
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Position
11
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AA seq
377 aa
AA seq
DB search
MKVFVKTLSGTNFEIEVKPADTVSDVKQAIETVQGAQYPAAKQMLIHQGKVLKDETTLEE
NNVVENSFIVIMLSKTKASPSGASTASAPAPSATQSQPAQTVATPQVSAPTVSVPEPTSV
TAAPAAAASVQTDVYGQAASNLVAGTVLESTVQQILDMGGGSWDRDTVVRALRAAFNNPE
RAVEYLYSGIPAQAELPPVAQAPSTGEQAANPQAQPQQAAPAAATGGPNANPLNLFPQGM
PAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQTDF
LRLINEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLEAMGFDRAMVLEVFFACNKNE
ELAANYLLDHMHEFEDQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtgaagacgctcagtggtaccaacttcgagatcgaagttaaacctgcc
gatacggtttctgatgttaaacaagctatagaaactgttcaaggtgcgcaataccctgct
gctaagcagatgctgatccaccaagggaaggttttaaaggatgagactacattggaagag
aacaatgttgttgagaacagtttcattgtcatcatgttgtccaagaccaaggcttctcca
agtggggcatcaaccgcatctgcacccgcacctagtgctactcagtctcagcctgctcag
actgtagctacacctcaggtttctgctccaactgtctcagttccagagcctacaagtgta
actgcagctccagctgctgctgcttcggttcaaacagatgtgtatggtcaagcagcgtca
aaccttgttgctggaactgttttagagtccactgttcagcaaattcttgacatgggtgga
ggtagttgggaccgtgacactgttgttcgtgctctgagggctgccttcaacaatcctgaa
agagctgttgaatatctatactcaggtatccctgctcaagctgaactcccgccagttgct
caagccccatctactggtgaacaggcagcaaatcctcaagcacagccccaacaagcagct
ccagcagctgcaactggtggtccaaacgcaaatccattaaacctgttcccccagggcatg
cccgctgcagatgctggtgctggagctggtaatcttgatttcctgcgtaacagtcagcag
ttccaagcattgcgagctatggtacaagcaaacccacaaattctacagcctatgcttcag
gagctcggtaaacaaaacccgcagcttgtgagactaattcaagagcatcagactgacttc
ctacgcttgataaatgaacctgtcgagggagaagagaatgttatggaacagttggaagca
gcaatgccacaagctgttaccgttacacctgaagagcgtgaagccattgaacggcttgaa
gcgatggggtttgatcgtgccatggtcttagaggtgttctttgcgtgtaacaagaatgaa
gaacttgcagctaactaccttctagatcacatgcacgagtttgaggaccaataa
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