Camelina sativa (false flax): 104724252
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Entry
104724252 CDS
T05044
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104724252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104724252
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104724252
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104724252
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Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
CHASE5
Motif
Other DBs
NCBI-GeneID:
104724252
NCBI-ProteinID:
XP_010441018
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Position
11:25813806..25815500
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AA seq
191 aa
AA seq
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MTTELVTPGDVIGKATEFKAGKGAYVNDTTIYASLTGTRRIVSPLPESLDQRAVVEVTGH
KAHGPIPEPGSVVIARVTKVMARMAAVDILCVGPKAVRENFAGVIRQQDVRATEIDKVDL
HQSFHAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAGETMVPISWTEMQCPLSGQ
TEQRKVAKVGS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggagctagtaacgccgggagatgtaattgggaaagcgactgagtttaaagcc
ggaaaaggagcttacgtcaacgacacaaccatctacgcttccctcacaggaactcgtcgg
attgtttctcctcttcccgaatcacttgaccagagagctgttgtggaagttacgggtcac
aaggcacatggtcctatacctgagcctggttctgttgtcatagcaagagtgactaaagtt
atggctcggatggctgctgttgatatcttatgtgttggtccaaaggccgttcgtgaaaat
tttgctggcgtgatcaggcaacaagatgttagagcaacagagatcgacaaagttgacttg
catcagtctttccatgctggtgacattgttagagctatggttctatctcttggtgatgca
cgggcatactatttgtcgactgctaagaatgaacttggtgtggtctcagcagaaagtgct
gcaggcgaaacaatggttcctataagttggacagagatgcagtgccccttgtcgggccaa
accgagcagagaaaagttgccaaggtgggtagttga
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