Entry |
|
Name |
|
KO |
|
Organism |
csat Camelina sativa (false flax)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104724765
09124 Replication and repair
03420 Nucleotide excision repair
104724765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:csat04121]
104724765
03400 DNA repair and recombination proteins [BR:csat03400]
104724765
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:csat04147]
104724765
Ubiquitin system [BR:csat04121]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
104724765
DNA repair and recombination proteins [BR:csat03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104724765
TCR (transcription coupled repair) factors
Cul4-CSA complex
104724765
Exosome [BR:csat04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104724765
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
11:30972866..30978139
|
AA seq |
791 aa
MSLPSKRSTCSAASASDDSSYSSPPMKKAKNDLHHSPQHPNAADKVGFPMEEDPTPAAAN
LSRKKATLPQPTKKLVIKLNKAKPSLPKNFEETTWQQLQSAIRAIFLKKPFSFHFESLYQ
AVDDLCMHKLAGKLYQQIEKECEEHISAALQSLVGQNTDLTVFLSLVEKCWQDFCDQMLM
IRSIALTLDRKYVIQNSNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERLAEA
VNRTLLSHLLKMFTALGIYMDSFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLH
EENERCILYIDAVTRKPLIAAVERQLLERHILVVLDKGFTTLMDGRRTEDLQRMQTLFSR
VNALESLRQAISAYVRKTGQKIVMDEEKDKDMVQSLLDFKASLDIIWEESFSKNESFGNT
IKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLEKVLVLFRFIQGKDVF
EAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFK
QSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLM
WQNSLGHCVLKADFSRGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTSIEDKELRRTL
QSLACGKVRVLLKHPKGRDVDDGDEFEFNDDFAAPLYRIKVNAIQMKETVEENTSTTERV
FQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERE
KSNPQIYNYLA |
NT seq |
2376 nt +upstreamnt +downstreamnt
atgtctcttcctagcaaacgctctacttgctccgccgcttctgcctccgacgactcttct
tactcttctcctcccatgaaaaaggccaaaaacgacctccaccattccccgcaacaccct
aacgccgccgacaaggttggctttcccatggaggaagatccaactcccgccgccgctaat
ctctctcgcaagaaagctacactgcctcaacctactaagaagcttgtaatcaagcttaat
aaagccaaaccatctctaccaaagaactttgaggagactacatggcaacagttgcaatca
gctatcagagctatattcctcaaaaaaccattttcttttcacttcgagagcctttaccag
gctgttgatgacctttgcatgcataagctggcaggaaagctttaccaacagattgagaag
gagtgtgaagaacacatctctgcagctttacaatctttagttgggcagaacactgatctc
actgttttcttgtcacttgtcgagaaatgctggcaagacttttgtgaccagatgcttatg
atccgtagtatagccttgactctggatagaaaatatgtgatacaaaactcaaatgtacgt
tcattgtgggagatgggtctgcagcttttccggaagcatctatcactggcccctgaagtt
gagcagaggactgttaaaggtctcttaagtatgattgaaaaagaaaggttagcagaagct
gttaataggactctacttagccatcttttgaagatgtttactgcactgggaatatatatg
gatagctttgagaaacctttccttgaaggaacttctgaattctatgcagccgaaggaatg
aaatacatgcagcagtctgatgttccggagtacctgaagcatgttgagggaaggttgcat
gaagagaatgaaagatgcatactctatatagatgcagtaaccaggaaaccattgatagca
gctgttgaaaggcaacttctagagcgtcatattcttgttgttcttgataagggttttaca
acgttaatggatggacgtcgtactgaggaccttcagaggatgcaaaccctgttttctagg
gtcaatgcacttgagtctctgaggcaggcaataagtgcatatgttcggaaaactgggcag
aagattgttatggatgaagagaaagataaagatatggtacaatcactattggacttcaag
gcttctcttgacataatatgggaagagagctttagcaagaacgaatcatttgggaacacc
atcaaagattcatttgagcatctgattaatcttcgacagaaccggccagctgagcttatt
gccaagtttttggacgagaagctccgtgctgggaataagggtacttctgaagaagaattg
gagagtactcttgaaaaagtcttggttttgttccgatttatccagggtaaagatgtgttt
gaagcattctacaaaaaggatcttgcgaagagactccttttgggaaagagtgcttcaatt
gatgcggagaaatccatgatctctaagcttaagactgagtgtggtagccagtttacaaac
aagctcgaagggatgttcaaggatattgaattgtcaaaggaaatcaacgagtcattcaaa
caatcttcccaggccagaacaaaactgccatcgggaattgagatgagtgtccacgtttta
acaacagggtactggccaacatatccacccatggatgttaagcttcctcatgaactaaat
gtctatcaggatatcttcaaagagttctatttaagcaagtacagtggtaggagattaatg
tggcaaaattcattaggccactgtgttttaaaggcagatttctccagaggtaaaaaggag
ctggctgtttccctgtttcaggctgttgtgttgatgttatttaacgatgcaatgaaactt
agctttgaagacattaaagattccactagcatagaggacaaggagctgagaaggactttg
cagtcgcttgcttgtgggaaagtccgtgtcctgctgaagcatccaaagggaagagatgta
gacgatggtgatgaatttgaatttaatgacgactttgcagctcccctgtaccgtattaag
gtaaatgcaatccagatgaaagagacagtagaggagaacacaagtacaacggaaagagta
ttccaggaccgacaataccagatcgatgcagccattgttcgtattatgaagacaagaaaa
gtcttgagccatactcttctaatcactgagctcttccaacagctcaaattcccaataaaa
ccggctgatctaaagaagaggattgaaagcttgatcgatcgagaatacttagagagggaa
aagagcaacccccagatatacaattatcttgcttag |