Camelina sativa (false flax): 104724865
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Entry
104724865 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
csat
Camelina sativa (false flax)
Pathway
csat04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104724865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104724865
03029 Mitochondrial biogenesis [BR:
csat03029
]
104724865
Membrane trafficking [BR:
csat04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
104724865
Others
Specific organelles associated proteins
Auto phagosome
104724865
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104724865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ATG16
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_HPS5
WDR54
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
PQQ_2
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_1st
WD40_RFWD3
PALB2_WD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
104724865
NCBI-ProteinID:
XP_019090780
LinkDB
All DBs
Position
2:complement(14522982..14525701)
Genome browser
AA seq
510 aa
AA seq
DB search
MMSVEEKAMEAIKDALRALRKRHLLEEGAHAPAISALSKPILSQGSEWKEKTEKLETELQ
QCYKAQSRLSEQLVIEVAESRTSKASLQEKELLINDTQKELTQRREECTRLQEELEEKTK
TVDVLIAENQEIRSQLEEMTNRAQKAESENKMLIDRWMLQKMQDAERLNEANDLYEEMLA
KLKANGLENLARQQVDGVVRSNEDGTDHFVESTIPSTCGHRIHAHEGGCGSIIFEYNSGT
LFTGGQDRAVKMWDTNSGTLIKSLFGSLGNILDLAVTHDNKSVIAASSSNNLFVWDVSSG
RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTXKLWDLQKGYCTNTVLFTSNCNAICL
SIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNV
FDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGTVHVWSLSKGNIVSILKE
QTSPILCCSWSGIGKPLASADKNGYVCTWT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagttgaggagaaagctatggaagcgatcaaagacgctttgagagctttgcgg
aagcgtcatcttcttgaagaaggagctcatgctcctgcgatttctgctctctctaagcct
attctttctcaggggtcagaatggaaggagaaaacagaaaaactggaaacagagttacag
caatgctacaaggctcaatcccgactgtctgaacaacttgtgatagaagtagctgaatca
agaacttcaaaagcttctttacaagagaaggagttgttaattaatgacacgcagaaggaa
ttaacccaaagaagggaagagtgtacacgattacaagaagagttagaggaaaagaccaag
acggtggatgtacttattgctgaaaaccaggaaatccggtctcagctggaggagatgaca
aatagagcgcaaaaagcagagtccgagaataaaatgttaattgatcgatggatgttacag
aagatgcaggatgctgaacgtcttaacgaggcaaatgatctctatgaagaaatgctagct
aagctgaaggcaaatggtttggaaaatcttgcgcggcaacaagttgatggcgttgtccgc
agcaatgaagatggaaccgatcactttgttgagtcaaccattccgtcaacatgtggacac
cgtatccatgctcatgaaggtggctgtggttcaataatctttgaatacaactcgggtact
ctgtttactggtgggcaagaccgagcagtaaaaatgtgggacaccaatagcgggacgtta
atcaaaagcttattcggttccttggggaatatacttgatcttgccgtaacccacgacaat
aaatccgtgatcgcagcaagcagctcaaacaatttgtttgtgtgggatgtaagctcgggt
agggtacgccatacactcacaggccacactgataaggtttgtgctgtggatgtgagcaaa
ttctccagccgacatgtcgtcagtgcagcatatgaccgtaccnataaactttgggatttg
cagaaaggttactgcactaacaccgtactctttaccagtaactgcaatgcaatctgcctc
agcatagatgggcttaccgtattctcaggccacatggatgggaatcttagattatgggat
attcaaactggtaaacttctctctgaagtagctggacattcttctgctgtgacctcggta
tcattgtcccggaatggaaataggatcttgacgagcgggagagacaacgtgcataatgtt
ttcgacacccggactcttgaaatatgtgggacgttgagagcatcagggaacagattggca
tcgaattggagccgatcatgtataagtccagatgatgattatgtggctgcgggatctgct
gatgggacggttcatgtatggtcactatctaaaggcaatattgtgagcattctcaaggag
caaacatctcctatactgtgttgttcttggagtgggatcgggaaaccattggcatccgct
gataaaaacggatacgtttgcacatggacatga
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